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ERMGT100_2_curated_scaffold_6

Search features with annotation key words

Displaying items 91-120 of 140 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_6_88
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(108117..109172)
-----------------
DNA (1056bp)
protein (352aa)
hypothetical protein MsalJ2_00657 n=1 Tax=Marinilabilia salmonicolor JCM 21150 RepID=UPI00029AFEF0 id=5223450 bin=16ft_combo_ws3_JS1 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_89
unknown

Not on your lists

comp(109289..109492)
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_6_90
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(109718..110947)
-----------------
DNA (1230bp)
protein (410aa)
cystathionine gamma-lyase (EC:4.4.1.1)
Cystathionine gamma-lyase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHZ5_CHLTF id=5223452 bin=16ft_combo_ws3_JS1 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_91
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(110947..112335)
-----------------
DNA (1389bp)
protein (463aa)
cbs; cystathionine beta-synthase (EC:4.2.1.22)
Cystathionine beta-synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM2_GEMAT id=5223453 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_92
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(112404..113546)
-----------------
DNA (1143bp)
protein (381aa)
hypothetical protein id=24559331 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative selenocysteine protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_93
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(113685..113840)
-----------------
DNA (156bp)
protein (52aa)
alias=16ft_combo_ws3_scaffold_126_31 id=24559332 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_94
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(113969..114262)
-----------------
DNA (294bp)
protein (98aa)
id=5223456 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_95
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

114287..115177
-----------------
DNA (891bp)
protein (297aa)
hypothetical protein id=24559333 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_96
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(115188..118739)
-----------------
DNA (3552bp)
protein (1184aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXS0_9BACT id=5223459 bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Organic solvent tolerance protein OstA-like protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_97
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(118736..120031)
-----------------
DNA (1296bp)
protein (432aa)
FolC bifunctional protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9D9_SPHTD id=5223460 bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
FolC bifunctional protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_98
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(120036..120995)
-----------------
DNA (960bp)
protein (320aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=3 Tax=Geobacter RepID=ACCD_GEOBB id=5223461 bin=16ft_combo_ws3_JS1 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
acetyl-CoA carboxylase, carboxyl transferase subunit beta
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_99
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(121037..122218)
-----------------
DNA (1182bp)
protein (394aa)
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CS47_9FIRM id=5223462 bin=16ft_combo_ws3_JS1 species=Ruminococcus lactaris genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_100
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(122215..122718)
-----------------
DNA (504bp)
protein (168aa)
Uncharacterized protein family UPF0079, ATPase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A9Q6_THEID id=5223463 bin=16ft_combo_ws3_JS1 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_101
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(122733..124298)
-----------------
DNA (1566bp)
protein (522aa)
Response regulator n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKW6_IGNAJ id=5223464 bin=16ft_combo_ws3_JS1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
response regulator
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_102
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(124347..125762)
-----------------
DNA (1416bp)
protein (472aa)
putative zinc protease (EC:3.4.24.-)
Putative zinc protease {ECO:0000313|EMBL:AEV85941.1}; EC=3.4.24.- {ECO:0000313|EMBL:AEV85941.1};; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
hypothetical protein n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI00036B5FA0
ERMGT100_2_curated_scaffold_6_103
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

125919..127580
-----------------
DNA (1662bp)
protein (554aa)
peptidase M28 n=1 Tax=Spirosoma panaciterrae RepID=UPI00035DE90D
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:ADB42506.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
ERMGT100_2_curated_scaffold_6_104
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(127602..128855)
-----------------
DNA (1254bp)
protein (418aa)
integral membrane sensor signal transduction histidine kinase id=24475741 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
histidine kinase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_105
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(128868..130145)
-----------------
DNA (1278bp)
protein (426aa)
serS; seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11] id=24475740 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_106
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(130159..130515)
-----------------
DNA (357bp)
protein (119aa)
BatC protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MMG7_CORCM id=5223467 bin=16ft_combo_ws3_JS1 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
BatC protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_107
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists


comp(130520..130924)
-----------------
DNA (405bp)
protein (135aa)
SSU ribosomal protein S16P n=1 Tax=Leuconostoc fallax KCTC 3537 RepID=UPI00020D97C1 id=5223468 bin=16ft_combo_ws3_JS1 species=Leuconostoc fallax genus=Leuconostoc taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
rpsP; SSU ribosomal protein S16P
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_108
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists


comp(130983..132311)
-----------------
DNA (1329bp)
protein (443aa)
Signal recognition particle protein n=2 Tax=Thermaerobacter RepID=E6SJE2_THEM7 id=5223469 bin=16ft_combo_ws3_JS1 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
signal recognition particle protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_109
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(132745..133425)
-----------------
DNA (681bp)
protein (227aa)
Ribulose-5-phosphate 3-epimerase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJB1_THEM7 id=5224651 bin=16ft_combo_ws3_JS1 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ribulose-phosphate 3-epimerase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_110
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(133422..133802)
-----------------
DNA (381bp)
protein (127aa)
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0002DDF470
cyclic nucleotide-binding protein
Tax=RBG_16_Aminicenantes_66_30_curated
ERMGT100_2_curated_scaffold_6_111
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133805..134209)
-----------------
DNA (405bp)
protein (135aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KRY2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGI77466.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
hypothetical protein
ERMGT100_2_curated_scaffold_6_112
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134206..134586)
-----------------
DNA (381bp)
protein (127aa)
Putative fluoride ion transporter CrcB n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=CRCB_METFK
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
camphor resistance protein CrcB
ERMGT100_2_curated_scaffold_6_113
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(134603..135736)
-----------------
DNA (1134bp)
protein (378aa)
(2Fe-2S)-binding protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B039
putative dioxygenase ferredoxin subunit
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
ERMGT100_2_curated_scaffold_6_114
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(135783..136568)
-----------------
DNA (786bp)
protein (262aa)
PASTA domain-containing protein id=24588768 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative serine/threonine protein kinase with PASTA sensor
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_115
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(136573..138246)
-----------------
DNA (1674bp)
protein (558aa)
N utilization substance protein B-like protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKV9_DESK7 id=5224653 bin=16ft_combo_ws3_JS1 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
N utilization substance protein B
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_116
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(138243..139181)
-----------------
DNA (939bp)
protein (313aa)
Peptide deformylase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PYW5_9FIRM id=5224654 bin=16ft_combo_ws3_JS1 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
methionyl-tRNA formyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_117
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(139196..139735)
-----------------
DNA (540bp)
protein (180aa)
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] id=24588764 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptide deformylase
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying items 91-120 of 140 in total

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