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ERMGT100_2_curated_scaffold_11

Search features with annotation key words

Displaying items 61-88 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_11_61

Not on your lists

comp(84281..84529)
-----------------
DNA (249bp)
protein (83aa)
Lipoprotein n=1 Tax=uncultured bacterium W4-87b RepID=H9BWU2_9BACT
Lipoprotein {ECO:0000313|EMBL:AFD03264.1}; TaxID=1130995 species="Bacteria; environmental samples.;" source="uncultured bacterium W4-87b.;"
putative lipoprotein
ERMGT100_2_curated_scaffold_11_62
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(84526..85101)
-----------------
DNA (576bp)
protein (192aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000361C71A
Uncharacterized protein {ECO:0000313|EMBL:KDA52879.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
secreted protein
ERMGT100_2_curated_scaffold_11_63
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(85113..87113)
-----------------
DNA (2001bp)
protein (667aa)
Uncharacterized protein id=3242911 bin=GWF2_Planctomycetes_42_9 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
PBS lyase HEAT domain-containing protein
Tax=CG_Arma_01
ERMGT100_2_curated_scaffold_11_64
unknown

Not on your lists

comp(87148..87759)
-----------------
DNA (612bp)
protein (204aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_11_65
unknown

Not on your lists

comp(87756..88211)
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_11_66
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

comp(88463..89557)
-----------------
DNA (1095bp)
protein (365aa)
ApbE family lipoprotein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TE4_SOLUE
ApbE family lipoprotein
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
ERMGT100_2_curated_scaffold_11_67
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

89635..90915
-----------------
DNA (1281bp)
protein (427aa)
Operon 2450 Gene 2 signal peptide protein Nitrosomon as europaea ATCC 19718 gi n=9 Tax=Burkholderia cepacia complex RepID=G7HIF9_9BURK id=5224963 bin=16ft_combo_ws3_JS1 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_11_68
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(90912..92048)
-----------------
DNA (1137bp)
protein (379aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI0002F6BE9C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAU93276.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
ERMGT100_2_curated_scaffold_11_69
unknown

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comp(92085..92618)
-----------------
DNA (534bp)
protein (178aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_11_70
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

92822..93823
-----------------
DNA (1002bp)
protein (334aa)
MoxR-like ATPase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DF22_SINAD id=5224964 bin=16ft_combo_ws3_JS1 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ATPase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_11_71
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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93820..95220
-----------------
DNA (1401bp)
protein (467aa)
steT; amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family id=24570912 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative permease
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_11_72
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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95217..96002
-----------------
DNA (786bp)
protein (262aa)
Methyltransferase type 12 n=3 Tax=Haloarcula RepID=G0HUC6_HALHT id=5224965 bin=16ft_combo_ws3_JS1 species=unknown genus=Haloarcula taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
methylase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_11_73
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

95981..96757
-----------------
DNA (777bp)
protein (259aa)
methylase id=24406640 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=Haloarcula taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
ERMGT100_2_curated_scaffold_11_74
unknown

Not on your lists

comp(96833..97474)
-----------------
DNA (642bp)
protein (214aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_11_75
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97639..98193)
-----------------
DNA (555bp)
protein (185aa)
dioxygenase n=1 Tax=Streptomyces sp. CNT372 RepID=UPI000374DB29
Intradiol ring-cleavage dioxygenase {ECO:0000313|EMBL:KDR34541.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
dioxygenase
ERMGT100_2_curated_scaffold_11_76
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

98329..99303
-----------------
DNA (975bp)
protein (325aa)
Uncharacterized protein n=2 Tax=Rhodothermus marinus RepID=D0MEZ8_RHOM4 id=5224966 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_11_77
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

99341..99937
-----------------
DNA (597bp)
protein (199aa)
Putative uncharacterized protein id=4349990 bin=GWF2_Lentisphaerae_49_21 species=Frankia sp. EUN1f genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Tax=GWF2_Lentisphaerae_49_21_curated
ERMGT100_2_curated_scaffold_11_78
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

99934..102018
-----------------
DNA (2085bp)
protein (695aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=Q2RZW9_SALRD id=5224968 bin=16ft_combo_ws3_JS1 species=Salinibacter ruber genus=Salinibacter taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
double-transmembrane region domain protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_11_79
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102387..103478)
-----------------
DNA (1092bp)
protein (364aa)
hypothetical protein id=24563961 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
IS110-family transposase
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
ERMGT100_2_curated_scaffold_11_80
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(103617..104420)
-----------------
DNA (804bp)
protein (268aa)
Outer membrane protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SG49_THIDA id=5224970 bin=16ft_combo_ws3_JS1 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
outer membrane protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_11_81
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

104505..105122
-----------------
DNA (618bp)
protein (206aa)
Possible integral membrane c-type cytochrome biogenesis protein dipz n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G615_9DELT id=5224971 bin=16ft_combo_ws3_JS1 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_11_82
unknown

Not on your lists

105184..105663
-----------------
DNA (480bp)
protein (160aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_11_83
unknown

Not on your lists

105818..106444
-----------------
DNA (627bp)
protein (209aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_11_84
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

106601..109999
-----------------
DNA (3399bp)
protein (1133aa)
Transcription-repair coupling factor n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RMB9_MOOTA id=5224972 bin=16ft_combo_ws3_JS1 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
transcription-repair coupling factor
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_11_85
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(109985..112036)
-----------------
DNA (2052bp)
protein (684aa)
Tax=CG_Solirubrobact_01
ERMGT100_2_curated_scaffold_11_86
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(112036..113916)
-----------------
DNA (1881bp)
protein (627aa)
Patatin n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WV47_PSEUU id=5225481 bin=16ft_combo_ws3_JS1 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative patatin-like phospholipase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_11_87
unknown

Not on your lists

114203..116257
-----------------
DNA (2055bp)
protein (685aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_11_88
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(116270..119773)
-----------------
DNA (3504bp)
protein (1168aa)
Cell wall/surface repeat protein id=1840377 bin=GWE2_Bacteroidetes_42_39 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
cell wall/surface repeat protein
Tax=GWE2_Bacteroidetes_42_39_curated
Displaying items 61-88 of 88 in total

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