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ERMGT100_2_curated_scaffold_30

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_30_1
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98..1765)
-----------------
DNA (1668bp)
protein (556aa)
Glycosyl transferase, family 39 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02D94_SOLUE
glycosyl transferase family protein
Tax=RBG_13_Deltaproteobacteria_61_14_curated
ERMGT100_2_curated_scaffold_30_2
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(1762..3798)
-----------------
DNA (2037bp)
protein (679aa)
Putative uncharacterized protein id=3545375 bin=GWF2_Lentisphaerae_57_35 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
Tax=GWF2_Lentisphaerae_57_35_curated
ERMGT100_2_curated_scaffold_30_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(3795..4661)
-----------------
DNA (867bp)
protein (289aa)
purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q098R6_STIAD id=5224323 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(4658..5563)
-----------------
DNA (906bp)
protein (302aa)
Inner-membrane translocator n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EG18_CHLL2 id=5224322 bin=16ft_combo_ws3_JS1 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
inner-membrane translocator
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(5563..6582)
-----------------
DNA (1020bp)
protein (340aa)
Inner-membrane translocator n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LT65_HALO1 id=5224320 bin=16ft_combo_ws3_JS1 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
inner-membrane translocator
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(6579..8066)
-----------------
DNA (1488bp)
protein (496aa)
nucleoside ABC transporter ATP-binding protein (EC:3.6.3.17); K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] id=24600349 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
nucleoside ABC transporter ATP-binding protein (EC:3.6.3.17)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_7

Not on your lists

comp(8120..9373)
-----------------
DNA (1254bp)
protein (418aa)
NAD-specific glutamate dehydrogenase n=1 Tax=mine drainage metagenome RepID=T1BJB3_9ZZZZ
NAD-specific glutamate dehydrogenase {ECO:0000313|EMBL:EQD53339.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Glu/Leu/Phe/Val dehydrogenase
ERMGT100_2_curated_scaffold_30_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(9393..10100)
-----------------
DNA (708bp)
protein (236aa)
Metallo-beta-lactamase n=1 Tax=Sporolactobacillus laevolacticus DSM 442 RepID=V6J732_9BACL
hydrolase glyoxylase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(10097..11125)
-----------------
DNA (1029bp)
protein (343aa)
Putative lipoprotein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5G2_GEMAT
basic membrane lipoprotein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(11214..12584)
-----------------
DNA (1371bp)
protein (457aa)
Peptidase M16 domain-containing protein n=8 Tax=Bradyrhizobium RepID=I0GEW8_9BRAD id=5224728 bin=16ft_combo_ws3_JS1 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
sigma-70 family RNA polymerase sigma factor
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

12740..13813
-----------------
DNA (1074bp)
protein (358aa)
adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4] id=24459375 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
adenosine deaminase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

14011..18474
-----------------
DNA (4464bp)
protein (1488aa)
Predicted protein id=24459528 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Streptomyces sp. C genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

18572..19087
-----------------
DNA (516bp)
protein (172aa)
Acyl-CoA hydrolase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VKX1_CLOSH id=5223339 bin=16ft_combo_ws3_JS1 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
acyl-CoA thioester hydrolase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

19111..20463
-----------------
DNA (1353bp)
protein (451aa)
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5T5_SPHTD id=5223340 bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_15
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

20500..21204
-----------------
DNA (705bp)
protein (235aa)
lipoate-protein ligase B (EC:2.3.1.181); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] id=24541865 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
lipB; lipoate biosynthesis protein B; Lipoate-protein ligase B (EC:2.3.1.-)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

21201..21611
-----------------
DNA (411bp)
protein (137aa)
Putative uncharacterized protein n=3 Tax=Anaeromyxobacter RepID=B4UAT0_ANASK id=5223342 bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_17
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

21622..22776
-----------------
DNA (1155bp)
protein (385aa)
Quinolinate synthase A n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L590_9BACI id=5223343 bin=16ft_combo_ws3_JS1 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
nadA; quinolinate synthetase subunit A
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

22779..23834
-----------------
DNA (1056bp)
protein (352aa)
lipoic acid synthetase (EC:2.8.1.8)
Lipoyl synthase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PR85_9FIRM id=5223344 bin=16ft_combo_ws3_JS1 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

23838..24629
-----------------
DNA (792bp)
protein (264aa)
Phenazine biosynthesis protein PhzF family id=1884744 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phenazine biosynthesis protein PhzF family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ERMGT100_2_curated_scaffold_30_20
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(24690..26705)
-----------------
DNA (2016bp)
protein (672aa)
thimet oligopeptidase (EC:3.4.24.15); K01392 thimet oligopeptidase [EC:3.4.24.15] id=24502008 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptidase, m3 (thimet oligopeptidase) family
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_21
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(26716..28764)
-----------------
DNA (2049bp)
protein (683aa)
thimet oligopeptidase (EC:3.4.24.15); K01392 thimet oligopeptidase [EC:3.4.24.15] id=24502008 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptidase, m3 (thimet oligopeptidase) family
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

29013..29219
-----------------
DNA (207bp)
protein (69aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMGT100_2_curated_scaffold_30_23
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(29235..29945)
-----------------
DNA (711bp)
protein (237aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023X9_SOLUE id=5223348 bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
short-chain dehydrogenase/reductase SDR
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_24
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(29963..30433)
-----------------
DNA (471bp)
protein (157aa)
alias=16ft_combo_ws3_scaffold_8306_6 id=24580020 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_25
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(30467..30841)
-----------------
DNA (375bp)
protein (125aa)
Antibiotic biosynthesis monooxygenase id=1940193 bin=GWB2_Ignavibacteria_35_12 species=Thermus sp. CCB_US3_UF1 genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
antibiotic biosynthesis monooxygenase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
ERMGT100_2_curated_scaffold_30_26
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

31053..34547
-----------------
DNA (3495bp)
protein (1165aa)
metH; methionine synthase (EC:2.1.1.13)
Methionine synthase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJM7_9CHLR id=5223355 bin=16ft_combo_ws3_JS1 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_30_27
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

34544..35152
-----------------
DNA (609bp)
protein (203aa)
GCN5-related N-acetyltransferase id=3547230 bin=GWC2_Ignavibacteria_56_12 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
acetyltransferase family protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
ERMGT100_2_curated_scaffold_30_28
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

35254..38013
-----------------
DNA (2760bp)
protein (920aa)
Protein kinase/protein beta WD-40 repeat id=8266675 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMGT100_2_curated_scaffold_30_29
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(38326..39300)
-----------------
DNA (975bp)
protein (325aa)
6-phosphofructokinase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BGW0_MEISD id=5223674 bin=16ft_combo_ws3_JS1 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
6-phosphofructokinase
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
ERMGT100_2_curated_scaffold_30_30
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39329..39682)
-----------------
DNA (354bp)
protein (118aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08YY0_STIAD
Copper transporter {ECO:0000313|EMBL:KFA93530.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
hypothetical protein
Displaying items 1-30 of 53 in total

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