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ERMGT100_2_curated_scaffold_40

Search features with annotation key words

Displaying items 31-51 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_40_31
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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38199..38792
-----------------
DNA (594bp)
protein (198aa)
flavin reductase domain-containing FMN-binding protein id=24533226 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Paenisporosarcina sp. TG20 genus=Paenisporosarcina taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
flavin reductase domain-containing FMN-binding protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ERMGT100_2_curated_scaffold_40_32
unknown

Not on your lists

38789..39592
-----------------
DNA (804bp)
protein (268aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_40_33
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

39649..39948
-----------------
DNA (300bp)
protein (100aa)
id=24533225 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMGT100_2_curated_scaffold_40_34
Nocardia cyriacigeorgica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(39909..40364)
-----------------
DNA (456bp)
protein (152aa)
Membrane protein-like protein n=1 Tax=Nocardia cyriacigeorgica (strain GUH-2) RepID=H6R9G8_NOCCG
Membrane protein-like protein
Membrane protein-like protein {ECO:0000313|EMBL:CCF64949.1}; TaxID=1127134 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia cyriacigeorgica (strain GUH-2).;"
ERMGT100_2_curated_scaffold_40_35
Candidatus Acidianus copahuensis, Acidianus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(40387..40536)
-----------------
DNA (150bp)
protein (50aa)
Uncharacterized protein {ECO:0000313|EMBL:EZQ10594.1}; TaxID=1160895 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Acidianus.;" source="Candidatus Acidianus copahuensis.;"
ERMGT100_2_curated_scaffold_40_36
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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40742..41719
-----------------
DNA (978bp)
protein (326aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158) id=24479396 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
UDP-N-acetylmuramate dehydrogenase (EC:1.3.1.98)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_40_37
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

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41730..42653
-----------------
DNA (924bp)
protein (308aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174472B
hypothetical protein
Tax=RIFOXYA2_FULL_RIF01_40_8_curated
ERMGT100_2_curated_scaffold_40_38
RifOxyB12_full_Anaerolinea_60_12_curated, Anaerolineae, Chloroflexi, Bacteria

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42949..43335
-----------------
DNA (387bp)
protein (129aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158) id=24479396 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
UDP-N-acetylenolpyruvoylglucosamine reductase
Tax=RifOxyB12_full_Anaerolinea_60_12_curated
ERMGT100_2_curated_scaffold_40_39
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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43332..45695
-----------------
DNA (2364bp)
protein (788aa)
sulfatase; K01130 arylsulfatase [EC:3.1.6.1] id=14426716 bin=bin1_lowGC species=Methylobacter marinus genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
arylsulfatase
Tax=CSP1_2_Dadabacteria
ERMGT100_2_curated_scaffold_40_40
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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45745..46380
-----------------
DNA (636bp)
protein (212aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IF49_ANADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92603.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMGT100_2_curated_scaffold_40_41
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

46456..47901
-----------------
DNA (1446bp)
protein (482aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI0003645988
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMGT100_2_curated_scaffold_40_42
R_OP3X_63_14, OP3X, Bacteria

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comp(47917..49113)
-----------------
DNA (1197bp)
protein (399aa)
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
ERMGT100_2_curated_scaffold_40_43
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(49211..50206)
-----------------
DNA (996bp)
protein (332aa)
Cyclic pyranopterin monophosphate synthase n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RE02_FRAAA
moaA; molybdenum cofactor biosynthesis protein A
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_40_44
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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50304..51305
-----------------
DNA (1002bp)
protein (334aa)
Appr-1-p processing domain protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EBR5_METMS
Appr-1-p processing domain protein
Appr-1-p processing domain protein {ECO:0000313|EMBL:ADE36616.1}; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).;"
ERMGT100_2_curated_scaffold_40_45
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51334..52002)
-----------------
DNA (669bp)
protein (223aa)
carbonate dehydratase (EC:4.2.1.1)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
Carbonic anhydrase n=1 Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7R7E3_KANKD
ERMGT100_2_curated_scaffold_40_46
Thermanaerovibrio acidaminovorans, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(51999..53105)
-----------------
DNA (1107bp)
protein (369aa)
Inner-membrane translocator n=1 Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B7W0_THEAS
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ACZ18363.1}; TaxID=525903 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 /; Su883) (Selenomonas acidaminovorans).;"
ERMGT100_2_curated_scaffold_40_47
MPF_Thermotogae_50_1627, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(53102..54184)
-----------------
DNA (1083bp)
protein (361aa)
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporters n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UE07_FERPD
ribose/xylose/arabinose/galactoside ABC transporter permease
Tax=MPF_Thermotogae_50_1627
ERMGT100_2_curated_scaffold_40_48
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(54177..55769)
-----------------
DNA (1593bp)
protein (531aa)
ABC transporter, ATP-binding protein n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L0W8_9BACT
monosaccharide ABC transporter ATP-binding protein, CUT2 family
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFD25767.1}; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum hydrogeniformans ATCC BAA-1850.;"
ERMGT100_2_curated_scaffold_40_49
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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55908..56984
-----------------
DNA (1077bp)
protein (359aa)
Aldo/keto reductase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AR92_RUBXD id=5225568 bin=16ft_combo_ws3_JS1 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_40_50
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

56981..58405
-----------------
DNA (1425bp)
protein (475aa)
beta-lactamase id=17256886 bin=RBG_16_Aminicenantes_63_14 tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
beta-lactamase
Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
ERMGT100_2_curated_scaffold_40_51

Not on your lists

59539..59964
-----------------
DNA (426bp)
protein (142aa)
hypothetical protein id=24563961 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:KKT54139.1}; TaxID=1618930 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_22.;"
transposase IS116/IS110/IS902 family protein
Displaying items 31-51 of 51 in total

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