ggKbase home page

ERMGT828_2_curated_scaffold_1

Search features with annotation key words

Displaying items 31-60 of 561 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT828_2_curated_scaffold_1_31
unknown

Not on your lists

27369..27881
-----------------
DNA (513bp)
protein (171aa)

This feature has no annotations

ERMGT828_2_curated_scaffold_1_32
R_KAZAN_48_13, Kazan, Bacteria

Not on your lists

comp(27925..29790)
-----------------
DNA (1866bp)
protein (622aa)
Tax=RIFCSPLOWO2_01_FULL_KAZAN_48_13_curated
ERMGT828_2_curated_scaffold_1_33
unknown

Not on your lists

comp(29799..31064)
-----------------
DNA (1266bp)
protein (422aa)

This feature has no annotations

ERMGT828_2_curated_scaffold_1_34
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(31054..31740)
-----------------
DNA (687bp)
protein (229aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKS4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59567.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ERMGT828_2_curated_scaffold_1_35
R_OD1_Uhrbacteria_51_9, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(31737..32480)
-----------------
DNA (744bp)
protein (248aa)
Predicted phosphatase/phosphohexomutase n=1 Tax=Prochlorococcus marinus (strain MIT 9215) RepID=A8G603_PROM2
phosphatase/phosphohexomutase
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_51_9_curated
ERMGT828_2_curated_scaffold_1_36
RIFOXYC2_FULL_OD1_Magasanikbacteria_42_28_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(32648..33469)
-----------------
DNA (822bp)
protein (274aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00036B5E36
Tax=RIFOXYC2_FULL_OD1_Magasanikbacteria_42_28_curated
ERMGT828_2_curated_scaffold_1_37
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(33485..33805)
-----------------
DNA (321bp)
protein (107aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00037DD0CF
hypothetical protein
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
ERMGT828_2_curated_scaffold_1_38
R_OD1_Uhrbacteria_51_9, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(33896..34519)
-----------------
DNA (624bp)
protein (208aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H583_DENA2
HAD-superfamily hydrolase
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_51_9_curated
ERMGT828_2_curated_scaffold_1_39
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(34551..36101)
-----------------
DNA (1551bp)
protein (517aa)
Polysaccharide biosynthesis protein n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4THC7_CALNY
polysaccharide biosynthesis protein
Tax=CG_Magasa_01
ERMGT828_2_curated_scaffold_1_40
GWA1_OP11_40_24_partial, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(36191..37063)
-----------------
DNA (873bp)
protein (291aa)
dTDP-4-dehydrorhamnose reductase id=4901198 bin=GWC2_OD1_43_27 species=Thermococcus barophilus genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KKR55415.1}; TaxID=1618406 species="Bacteria; Microgenomates.;" source="Microgenomates (Curtissbacteria) bacterium GW2011_GWA1_40_24.;"
dTDP-4-dehydrorhamnose reductase
ERMGT828_2_curated_scaffold_1_41
R_OP11_Roizmanbacteria_36_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(37050..37676)
-----------------
DNA (627bp)
protein (209aa)
dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6U9S7_9EURY
dTDP-4-dehydrorhamnose 3,5-epimerase
Tax=RIFCSPLOWO2_02_FULL_OP11_Roizmanbacteria_36_11_curated
ERMGT828_2_curated_scaffold_1_42
R_RIF_OD1_10_39_26, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(37676..38626)
-----------------
DNA (951bp)
protein (317aa)
GDP-L-fucose synthase n=1 Tax=uncultured bacterium RepID=K2CKM5_9BACT
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_10_39_26_curated
ERMGT828_2_curated_scaffold_1_43
R_SM2F11_46_14, SM2F11, Bacteria

Not on your lists

38724..39548
-----------------
DNA (825bp)
protein (275aa)
hypothetical protein n=1 Tax=Paenibacillus massiliensis RepID=UPI00036770CA
beta-lactamase domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
ERMGT828_2_curated_scaffold_1_44
GWA2_OD1_37_8, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(39618..40676)
-----------------
DNA (1059bp)
protein (353aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZY3_METPS
Uncharacterized protein {ECO:0000313|EMBL:KKQ40654.1}; TaxID=1619036 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_37_8.;"
hypothetical protein
ERMGT828_2_curated_scaffold_1_45
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(40706..41098)
-----------------
DNA (393bp)
protein (131aa)
Ribosomal protein S23 n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A2A3_MELRP
30S ribosomal protein S23
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
ERMGT828_2_curated_scaffold_1_46
R_OD1_53_13, Parcubacteria, Bacteria

Not on your lists

comp(41127..41903)
-----------------
DNA (777bp)
protein (259aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DFJ2_9BACT
Endonuclease; Exonuclease
Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated
ERMGT828_2_curated_scaffold_1_47
R_OD1_Falkowbacteria_56_16, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(41967..42983)
-----------------
DNA (1017bp)
protein (339aa)
bhy:BHWA1_00145 gmd; GDP-D-mannose dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] id=19451 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
gmd; GDP-D-mannose dehydratase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_56_16_curated
ERMGT828_2_curated_scaffold_1_48
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

43142..44197
-----------------
DNA (1056bp)
protein (352aa)
Second mannosyl transferase id=4077936 bin=GWB1_KAZAN_52_7 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=GWB1_KAZAN_52_7 organism_group=Kazan
exopolysaccharide biosynthesis glycosyltransferase
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
ERMGT828_2_curated_scaffold_1_49
RIFOXYB2_FULL_OD1_Magasanikbacteria_38_10_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(44209..46458)
-----------------
DNA (2250bp)
protein (750aa)
id=2648960 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Tax=RIFOXYB2_FULL_OD1_Magasanikbacteria_38_10_curated
ERMGT828_2_curated_scaffold_1_50
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(46495..48294)
-----------------
DNA (1800bp)
protein (600aa)
peptidase S8 and S53, subtilisin, kexin, sedolisin id=2169412 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
subtilisin-like serine protease
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
ERMGT828_2_curated_scaffold_1_51
R_SM2F11_50_11, SM2F11, Bacteria

Not on your lists

comp(48307..49875)
-----------------
DNA (1569bp)
protein (523aa)
Secretion protein HlyD n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZV3_9BACT
RND family efflux transporter, MFP subunit
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_50_11_curated
ERMGT828_2_curated_scaffold_1_52
RIFOXYB2_FULL_OD1_Magasanikbacteria_38_10_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(49886..52108)
-----------------
DNA (2223bp)
protein (741aa)
id=2648960 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
Tax=RIFOXYB2_FULL_OD1_Magasanikbacteria_38_10_curated
ERMGT828_2_curated_scaffold_1_53
R_SM2F11_43_13b, SM2F11, Bacteria

Not on your lists

comp(52112..52801)
-----------------
DNA (690bp)
protein (230aa)
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13b_curated
ERMGT828_2_curated_scaffold_1_54
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(52973..56413)
-----------------
DNA (3441bp)
protein (1147aa)
seg 623..634 id=13284 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
psrP; Large surface exposed glycoprotein PsrP
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
ERMGT828_2_curated_scaffold_1_trna_1
unknown

Not on your lists

57028..57098
-----------------
DNA (71bp)
transferRNA Pro
ERMGT828_2_curated_scaffold_1_55
unknown

Not on your lists

57242..57511
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

ERMGT828_2_curated_scaffold_1_56
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

57501..58235
-----------------
DNA (735bp)
protein (245aa)
TolA protein id=5095360 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
exported protein of unknown function
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
ERMGT828_2_curated_scaffold_1_57
R_RIF_OD1_07_48_27b, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(58329..59177)
-----------------
DNA (849bp)
protein (283aa)
dma:DMR_44980 transaldolase family protein; K00616 transaldolase [EC:2.2.1.2] id=71440 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
transaldolase family protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_48_27b_curated
ERMGT828_2_curated_scaffold_1_58
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(59219..59617)
-----------------
DNA (399bp)
protein (133aa)
Uncharacterized protein id=2232851 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
ERMGT828_2_curated_scaffold_1_59
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

comp(59654..60358)
-----------------
DNA (705bp)
protein (235aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IK31_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKS19074.1}; TaxID=1618904 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
decarboxylase
Displaying items 31-60 of 561 in total

View Taxonomy