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ERMGT100_2_curated_scaffold_2

Search features with annotation key words

Displaying items 121-150 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_2_119
unknown

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154205..154777
-----------------
DNA (573bp)
protein (191aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_2_120
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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154794..155156
-----------------
DNA (363bp)
protein (121aa)
sulfurtransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174558E
Rhodanese domain protein {ECO:0000313|EMBL:AKF03978.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
ERMGT100_2_curated_scaffold_2_121
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155189..155722
-----------------
DNA (534bp)
protein (178aa)
rare lipoprotein A n=1 Tax=Pseudomonas mendocina RepID=UPI00035F2821
rare lipoprotein A
Rare lipoprotein A {ECO:0000313|EMBL:AEB56971.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
ERMGT100_2_curated_scaffold_2_122
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155768..157291
-----------------
DNA (1524bp)
protein (508aa)
Benzoate-CoA ligase family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LVL9_HALO1
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EYF05781.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
benzoate-CoA ligase family
ERMGT100_2_curated_scaffold_2_123
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(157294..159141)
-----------------
DNA (1848bp)
protein (616aa)
Fibronectin type III domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAW1_9BACT
regulatory P domain of subtilisin-like proprotein convertases
Tax=RBG_13_Bacteroidetes_43_22_curated
ERMGT100_2_curated_scaffold_2_124
bacterium UASB270, Bacteria

Not on your lists

comp(159157..160257)
-----------------
DNA (1101bp)
protein (367aa)
FG-GAP repeat protein n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UNF9_9CYAN
Fibronectin type III domain protein {ECO:0000313|EMBL:GAK57195.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
regulatory P domain of subtilisin-like proprotein convertases
ERMGT100_2_curated_scaffold_2_125
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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comp(160257..161015)
-----------------
DNA (759bp)
protein (253aa)
Vcbs n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZSR3_9BACT
regulatory P domain of subtilisin-like proprotein convertases
Tax=CG_Anaero_02
ERMGT100_2_curated_scaffold_2_126
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

161441..162121
-----------------
DNA (681bp)
protein (227aa)
ial:IALB_2990 Cell wall anchor domain protein id=719743 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
cell wall anchor domain-containing protein
Cell wall anchor domain protein {ECO:0000313|EMBL:AFH50693.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
ERMGT100_2_curated_scaffold_2_127
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(162108..165596)
-----------------
DNA (3489bp)
protein (1163aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000382F04F
Uncharacterized protein {ECO:0000313|EMBL:CAQ45971.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
hypothetical protein
ERMGT100_2_curated_scaffold_2_128
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(165689..166600)
-----------------
DNA (912bp)
protein (304aa)
alias=16ft_combo_ws3_scaffold_2767_26 id=24454754 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_2_129
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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166720..168174
-----------------
DNA (1455bp)
protein (485aa)
Peptidase M28 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024Z2_SOLUE
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:ABJ83434.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
ERMGT100_2_curated_scaffold_2_130
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

168171..169127
-----------------
DNA (957bp)
protein (319aa)
LmbE family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TU34_9CHLR
mshB; N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB
Tax=RBG_16_Chloroflexi_56_8_curated
ERMGT100_2_curated_scaffold_2_131
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

169124..170623
-----------------
DNA (1500bp)
protein (500aa)
Aromatic-L-amino-acid decarboxylase (EC:4.1.1.28)
Aromatic-L-amino-acid decarboxylase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKJ7_MARHT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMGT100_2_curated_scaffold_2_132
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

170962..172230
-----------------
DNA (1269bp)
protein (423aa)
HNH endonuclease id=24415228 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
HNH endonuclease
Tax=RBG_16_Acidobacteria_70_10_curated
ERMGT100_2_curated_scaffold_2_133
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172341..173027)
-----------------
DNA (687bp)
protein (229aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=alpha proteobacterium D323 RepID=M4HWZ7_9PROT
msrA2; peptide methionine sulfoxide reductase MsrA
ERMGT100_2_curated_scaffold_2_134
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(173131..173892)
-----------------
DNA (762bp)
protein (254aa)
Glycosyl transferase family 2 n=1 Tax=Geobacillus sp. (strain WCH70) RepID=C5D9T5_GEOSW
Glycosyl transferase {ECO:0000313|EMBL:CDM64374.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
family 2 glycosyl transferase
ERMGT100_2_curated_scaffold_2_135
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(173920..175230)
-----------------
DNA (1311bp)
protein (437aa)
citrate synthase i (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] id=24457727 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
citrate synthase I (EC:2.3.3.1)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_2_136
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

175404..176894
-----------------
DNA (1491bp)
protein (497aa)
malQ; 4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
4-alpha-glucanotransferase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MXP8_ANATU
ERMGT100_2_curated_scaffold_2_137
unknown

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177083..177832
-----------------
DNA (750bp)
protein (250aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_2_138
unknown

Not on your lists

comp(177920..178228)
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_2_139
unknown

Not on your lists

comp(178297..178614)
-----------------
DNA (318bp)
protein (106aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_2_140
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(178672..179982)
-----------------
DNA (1311bp)
protein (437aa)
ATP-binding region ATPase domain protein n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W1B4_DESIS
ATPase ATP-binding domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMGT100_2_curated_scaffold_2_141
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179987..180337)
-----------------
DNA (351bp)
protein (117aa)
Anti-sigma factor antagonist n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YYG9_DESAF
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
ERMGT100_2_curated_scaffold_2_142
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

comp(180319..182412)
-----------------
DNA (2094bp)
protein (698aa)
HAMP domain-containing protein,cache domain-containing protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HG37_METFS
HAMP domain-containing protein,cache domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
ERMGT100_2_curated_scaffold_2_143
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

comp(182409..184400)
-----------------
DNA (1992bp)
protein (664aa)
Tetratricopeptide TPR_1 repeat-containing protein id=3383468 bin=GWA2_Elusimicrobia_69_24 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=BJP_IG2158_Zixibacteria_48_33
ERMGT100_2_curated_scaffold_2_144
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

comp(184397..191479)
-----------------
DNA (7083bp)
protein (2361aa)
UPI0003D1C796 related cluster n=1 Tax=unknown RepID=UPI0003D1C796
Tax=BJP_IG2158_Zixibacteria_48_33
ERMGT100_2_curated_scaffold_2_145
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(191749..193779)
-----------------
DNA (2031bp)
protein (677aa)
Gll1703 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NJX8_GLOVI id=5225924 bin=16ft_combo_ws3_JS1 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
tolB; peptidase S9 prolyl oligopeptidase active site domain protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_2_146
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193795..194955)
-----------------
DNA (1161bp)
protein (387aa)
Putative glutamine-dependent sugar transaminase n=1 Tax=Bacillus sp. JS RepID=I0FAA7_9BACI
putative glutamine-dependent sugar transaminase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
ERMGT100_2_curated_scaffold_2_147
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

195164..195775
-----------------
DNA (612bp)
protein (204aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CKS5_MYXFH
hypothetical protein
Tax=GWC2_Geobacteraceae_53_11_curated
ERMGT100_2_curated_scaffold_2_148
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

195919..196530
-----------------
DNA (612bp)
protein (204aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CKS5_MYXFH
hypothetical protein
Tax=GWC2_Geobacteraceae_53_11_curated
Displaying items 121-150 of 156 in total

View Taxonomy