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ERMGT100_2_curated_scaffold_6

Search features with annotation key words

Displaying items 61-90 of 140 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_6_61
unknown

Not on your lists

comp(74587..75699)
-----------------
DNA (1113bp)
protein (371aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_6_62
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(75783..76415)
-----------------
DNA (633bp)
protein (211aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U0ZPY1_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:ERE06615.1}; TaxID=1388764 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans EGD-HP2.;"
hypothetical protein
ERMGT100_2_curated_scaffold_6_63
unknown

Not on your lists

comp(76492..76905)
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_6_trna_3
unknown

Not on your lists

comp(77761..77834)
-----------------
DNA (74bp)
transferRNA Arg
ERMGT100_2_curated_scaffold_6_trna_2
unknown

Not on your lists

comp(77855..77943)
-----------------
DNA (89bp)
transferRNA Ser
ERMGT100_2_curated_scaffold_6_trna_1
unknown

Not on your lists

comp(77954..78036)
-----------------
DNA (83bp)
transferRNA Ser
ERMGT100_2_curated_scaffold_6_64
unknown

Not on your lists

78201..78671
-----------------
DNA (471bp)
protein (157aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_6_65
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

78927..80714
-----------------
DNA (1788bp)
protein (596aa)
Uncharacterized protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1KYC2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKB47511.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
hypothetical protein
ERMGT100_2_curated_scaffold_6_66
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

80831..83668
-----------------
DNA (2838bp)
protein (946aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6583E
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACF14194.1}; Flags: Precursor;; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
ERMGT100_2_curated_scaffold_6_67
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

83695..84348
-----------------
DNA (654bp)
protein (218aa)
Uncharacterized protein {ECO:0000313|EMBL:KER10408.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
ERMGT100_2_curated_scaffold_6_68
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(84345..85169)
-----------------
DNA (825bp)
protein (275aa)
ABC transporter permease; K09686 antibiotic transport system permease protein id=24517716 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ABC transporter permease
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_69
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(85166..85987)
-----------------
DNA (822bp)
protein (274aa)
ABC-2 type transporter n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B2R5_HERA2 id=5223431 bin=16ft_combo_ws3_JS1 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_70
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(85984..86991)
-----------------
DNA (1008bp)
protein (336aa)
putative ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein id=24517718 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative ABC transporter ATP-binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_71
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

87095..89725
-----------------
DNA (2631bp)
protein (877aa)
Aminopeptidase, putative n=1 Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CP15_SHEPW id=5223428 bin=16ft_combo_ws3_JS1 species=Shewanella piezotolerans genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
aminopeptidase N
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_72
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(89722..90492)
-----------------
DNA (771bp)
protein (257aa)
Methyltransferase type 11 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C228_SPHTD id=5223434 bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
methyltransferase type 11
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_73
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(90624..91733)
-----------------
DNA (1110bp)
protein (370aa)
tRNA-specific 2-thiouridylase MnmA n=2 Tax=Acidithiobacillus caldus RepID=F9ZM01_ACICS id=5223435 bin=16ft_combo_ws3_JS1 species=Acidithiobacillus caldus genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
thiouridylase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_74
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(91730..92887)
-----------------
DNA (1158bp)
protein (386aa)
class V aminotransferase (EC:2.8.1.7)
Cysteine desulfurase family protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PLM1_9FIRM id=5223436 bin=16ft_combo_ws3_JS1 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_75
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(92909..93574)
-----------------
DNA (666bp)
protein (222aa)
TPR repeat-containing protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J9B9_NOSP7 id=5223437 bin=16ft_combo_ws3_JS1 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_76
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(93673..94845)
-----------------
DNA (1173bp)
protein (391aa)
Methionine gamma-lyase n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RA29_9RHOO id=5223438 bin=16ft_combo_ws3_JS1 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
cystathionine gamma-synthase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_77
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

94911..95957
-----------------
DNA (1047bp)
protein (349aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ04_9BACT id=5223439 bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
lipopolysaccharide heptosyltransferase I
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_78
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(95934..96119)
-----------------
DNA (186bp)
protein (62aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI0003786BDE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW09572.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
ERMGT100_2_curated_scaffold_6_79
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(96129..97001)
-----------------
DNA (873bp)
protein (291aa)
integral membrane protease subunit; Band 7 family id=24575397 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_80
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

97103..97915
-----------------
DNA (813bp)
protein (271aa)
Putative uncharacterized protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QH12_DESB2 id=5223440 bin=16ft_combo_ws3_JS1 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_81
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(98002..99720)
-----------------
DNA (1719bp)
protein (573aa)
Periplasmic protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] id=24561145 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
periplasmic protease
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_82
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(99741..100916)
-----------------
DNA (1176bp)
protein (392aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020Q6_SOLUE id=5223443 bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_83
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

101137..102531
-----------------
DNA (1395bp)
protein (465aa)
Glycoside hydrolase family 3 domain protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXW2_TRURR id=5223444 bin=16ft_combo_ws3_JS1 species=Truepera radiovictrix genus=Truepera taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glycoside hydrolase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_84
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(102482..104113)
-----------------
DNA (1632bp)
protein (544aa)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EDH0_9CHLR id=5223446 bin=16ft_combo_ws3_JS1 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
5-oxoprolinase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_85
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(104110..106083)
-----------------
DNA (1974bp)
protein (658aa)
5-oxoprolinase (EC:3.5.2.9)
Hydantoin utilization protein A n=2 Tax=Desulfovibrio magneticus RepID=C4XH07_DESMR id=5223447 bin=16ft_combo_ws3_JS1 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_86
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(106080..106571)
-----------------
DNA (492bp)
protein (164aa)
id=5223448 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_6_87
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(106699..108120)
-----------------
DNA (1422bp)
protein (474aa)
Uncharacterized protein n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9UQL9_9CHRO id=5223449 bin=16ft_combo_ws3_JS1 species=Chamaesiphon minutus genus=Chamaesiphon taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying items 61-90 of 140 in total

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