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ERMGT100_2_curated_scaffold_11

Search features with annotation key words

Displaying items 31-60 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_11_31
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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40301..41449
-----------------
DNA (1149bp)
protein (383aa)
Calcium/proton exchanger n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60CG4_METCA id=5225075 bin=16ft_combo_ws3_JS1 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
cax-1; calcium/proton exchanger
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_11_32
Mesotoga infera, Mesotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

41716..50289
-----------------
DNA (8574bp)
protein (2858aa)
Cell wall/surface repeat protein id=1840377 bin=GWE2_Bacteroidetes_42_39 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Uncharacterized protein {ECO:0000313|EMBL:CCU85476.1}; TaxID=1236046 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Mesotoga.;" source="Mesotoga infera.;"
hypothetical protein
ERMGT100_2_curated_scaffold_11_33

Not on your lists

comp(50309..51868)
-----------------
DNA (1560bp)
protein (520aa)
Fis family transcriptional regulator n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IDU4_PHYMF
Marine sediment metagenome DNA, contig: S01H1_S17395 {ECO:0000313|EMBL:GAG26236.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Fis family transcriptional regulator
ERMGT100_2_curated_scaffold_11_34
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(51873..54164)
-----------------
DNA (2292bp)
protein (764aa)
Serine/threonine protein kinase id=8267299 bin=CD_OP8_4m species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
serine/threonine protein kinase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
ERMGT100_2_curated_scaffold_11_35
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(54375..55028)
-----------------
DNA (654bp)
protein (218aa)
Uncharacterized protein id=4169652 bin=GWA2_Ignavibacteria_55_11 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=GWA2_Ignavibacteria_54_16_curated
ERMGT100_2_curated_scaffold_11_36
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55107..56378)
-----------------
DNA (1272bp)
protein (424aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BEFEB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33129.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
ERMGT100_2_curated_scaffold_11_37
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

56724..57305
-----------------
DNA (582bp)
protein (194aa)
cysteine dioxygenase n=1 Tax=Dyella japonica RepID=UPI00030C0864
Cysteine dioxygenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMGT100_2_curated_scaffold_11_38
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57350..58288
-----------------
DNA (939bp)
protein (313aa)
Uncharacterized protein n=2 Tax=Rhodospirillum rubrum RepID=Q2RWT6_RHORT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC21409.1}; Flags: Precursor;; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
ERMGT100_2_curated_scaffold_11_39
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

58347..58646
-----------------
DNA (300bp)
protein (100aa)
ATP-dependent Clp protease ClpS n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745009
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ATP-dependent Clp protease adaptor protein ClpS
ERMGT100_2_curated_scaffold_11_40
unknown

Not on your lists

58643..59158
-----------------
DNA (516bp)
protein (172aa)
hypothetical protein
ERMGT100_2_curated_scaffold_11_41
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(59168..59980)
-----------------
DNA (813bp)
protein (271aa)
Carbon-nitrogen hydrolase family protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUZ0_SYNAS id=5225335 bin=16ft_combo_ws3_JS1 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
carbon-nitrogen hydrolase family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_11_42
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60061..61860
-----------------
DNA (1800bp)
protein (600aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G9V3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:AHY51305.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
hypothetical protein
ERMGT100_2_curated_scaffold_11_43
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

62097..64232
-----------------
DNA (2136bp)
protein (712aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V2J4_TERSS id=5223833 bin=16ft_combo_ws3_JS1 species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_11_44
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

64366..64872
-----------------
DNA (507bp)
protein (169aa)
id=5223834 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_11_45
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64928..65866)
-----------------
DNA (939bp)
protein (313aa)
membrane protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000375A2F6
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:ACL71678.1}; Flags: Precursor;; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
ERMGT100_2_curated_scaffold_11_46
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

66126..68237
-----------------
DNA (2112bp)
protein (704aa)
hypothetical protein id=24596140 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_11_47
unknown

Not on your lists

68252..69079
-----------------
DNA (828bp)
protein (276aa)
coagulation factor 5/8 type domain-containing protein id=24596139 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Coraliomargarita akajimensis genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ERMGT100_2_curated_scaffold_11_48
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(69084..70079)
-----------------
DNA (996bp)
protein (332aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A858_GEMAT id=5224739 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative oxidoreductase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_11_49
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(70076..70624)
-----------------
DNA (549bp)
protein (183aa)
Uncharacterized protein id=3531969 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB1_Bdellovibrionales_55_8_curated
ERMGT100_2_curated_scaffold_11_50
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

Not on your lists

comp(70621..71643)
-----------------
DNA (1023bp)
protein (341aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U6S4_MYXSD
hypothetical protein
Tax=RBG_16_Nitrospirae_43_11_curated
ERMGT100_2_curated_scaffold_11_51
unknown

Not on your lists

comp(71640..72041)
-----------------
DNA (402bp)
protein (134aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_11_52
unknown

Not on your lists

comp(72038..72961)
-----------------
DNA (924bp)
protein (308aa)
tetratricopeptide repeat protein
ERMGT100_2_curated_scaffold_11_53
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72958..77820)
-----------------
DNA (4863bp)
protein (1621aa)
Putative uncharacterized protein n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FH94_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGW53768.1}; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia jerichonana (vent Tica).;"
hypothetical protein
ERMGT100_2_curated_scaffold_11_54
unknown

Not on your lists

comp(77831..78679)
-----------------
DNA (849bp)
protein (283aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_11_55
unknown

Not on your lists

comp(78679..79254)
-----------------
DNA (576bp)
protein (192aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_11_56
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(79265..80182)
-----------------
DNA (918bp)
protein (306aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ABI67481.1}; EC=3.5.1.28 {ECO:0000313|EMBL:ABI67481.1};; Flags: Precursor;; TaxID=335541 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen).;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0B0M3_SYNWW
ERMGT100_2_curated_scaffold_11_57
unknown

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comp(80202..80828)
-----------------
DNA (627bp)
protein (209aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_11_58
unknown

Not on your lists

comp(80879..81487)
-----------------
DNA (609bp)
protein (203aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_11_59

Not on your lists

comp(81492..83123)
-----------------
DNA (1632bp)
protein (544aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium W4-87b RepID=H9BWU4_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AFD03266.1}; TaxID=1130995 species="Bacteria; environmental samples.;" source="uncultured bacterium W4-87b.;"
ERMGT100_2_curated_scaffold_11_60

Not on your lists

comp(83151..84296)
-----------------
DNA (1146bp)
protein (382aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium W4-87b RepID=H9BWU3_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AFD03265.1}; TaxID=1130995 species="Bacteria; environmental samples.;" source="uncultured bacterium W4-87b.;"
hypothetical protein
Displaying items 31-60 of 88 in total

View Taxonomy