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ERMGT100_2_curated_scaffold_23

Search features with annotation key words

Displaying items 61-90 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_23_61
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

91315..91908
-----------------
DNA (594bp)
protein (198aa)
LexA family transcriptional repressor (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88] id=24561320 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Fibrobacter succinogenes genus=Fibrobacter taxon_order=Fibrobacterales taxon_class=Fibrobacteria phylum=Fibrobacteres tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
LexA family transcriptional repressor (EC:3.4.21.88)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_62
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

92004..92462
-----------------
DNA (459bp)
protein (153aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT13_9BIFI id=5223984 bin=16ft_combo_ws3_JS1 species=Bifidobacterium catenulatum genus=Bifidobacterium taxon_order=Bifidobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
transposase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_63
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(92555..93457)
-----------------
DNA (903bp)
protein (301aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJT2_SYNFM id=5223985 bin=16ft_combo_ws3_JS1 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_64
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(93427..94611)
-----------------
DNA (1185bp)
protein (395aa)
C-terminal processing peptidase id=24561317 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
carboxyl-terminal protease
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_65
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(94752..95165)
-----------------
DNA (414bp)
protein (138aa)
hypothetical protein id=24561316 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_66
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(95269..96129)
-----------------
DNA (861bp)
protein (287aa)
parB-like partition protein; K03497 chromosome partitioning protein, ParB family id=24561315 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
parB-like partition protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_67
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(96107..96883)
-----------------
DNA (777bp)
protein (259aa)
Cobyrinic acid ac-diamide synthase n=4 Tax=Alicyclobacillus RepID=C8WVA7_ALIAD id=5223989 bin=16ft_combo_ws3_JS1 species=unknown genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
chromosome partitioning ATPase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_68
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(97034..97711)
-----------------
DNA (678bp)
protein (226aa)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JT21_9GAMM id=5223990 bin=16ft_combo_ws3_JS1 species=gamma proteobacterium HTCC5015 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
gidB; 16S rRNA methyltransferase GidB
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_69
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(98518..100293)
-----------------
DNA (1776bp)
protein (592aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=MNMG_THEYD id=5223991 bin=16ft_combo_ws3_JS1 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glucose inhibited division protein A
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_70
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(100290..101714)
-----------------
DNA (1425bp)
protein (475aa)
tRNA modification GTPase MnmE n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=MNME_SYMTH id=5223992 bin=16ft_combo_ws3_JS1 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
trmE; tRNA modification GTPase TrmE
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_71
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(101773..102294)
-----------------
DNA (522bp)
protein (174aa)
R3H domain protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VMG8_MEGEL id=5223993 bin=16ft_combo_ws3_JS1 species=Megasphaera elsdenii genus=Megasphaera taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
single-stranded nucleic acid binding r3h
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_72
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102291..102998)
-----------------
DNA (708bp)
protein (236aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XAM5_RHIFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL52931.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
ERMGT100_2_curated_scaffold_23_73
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(103484..105316)
-----------------
DNA (1833bp)
protein (611aa)
Membrane protein insertase YidC n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=YIDC_SYNAS id=5223995 bin=16ft_combo_ws3_JS1 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
protein translocase subunit YidC
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_74
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(105313..105537)
-----------------
DNA (225bp)
protein (75aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP8_GEMAT id=5223996 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_75
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(105534..105926)
-----------------
DNA (393bp)
protein (131aa)
ribonuclease P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5] id=24486236 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ribonuclease P protein component
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_76
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists


comp(106024..106167)
-----------------
DNA (144bp)
protein (48aa)
50S ribosomal protein L34 n=1 Tax=Nitratiruptor sp. (strain SB155-2) RepID=RL34_NITSB id=5223998 bin=16ft_combo_ws3_JS1 species=unknown genus=Nitratiruptor taxon_order=unknown taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
50S ribosomal protein L34P
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_77
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

106372..107298
-----------------
DNA (927bp)
protein (309aa)
Uncharacterized protein id=17103755 bin=RBG_16_Aminicenantes_63_14 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_78
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

107295..107618
-----------------
DNA (324bp)
protein (108aa)
Uncharacterized protein n=1 Tax=Gordonia polyisoprenivorans (strain DSM 44266 / VH2) RepID=H6N4F5_GORPV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA72424.1}; TaxID=1112204 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans (strain DSM 44266 / VH2).;"
ERMGT100_2_curated_scaffold_23_79
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

107646..108275
-----------------
DNA (630bp)
protein (210aa)
permease, glycerol uptake facilitator id=14430536 bin=bin3_NC10 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
major intrinsic protein
Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
ERMGT100_2_curated_scaffold_23_80
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

108348..110366
-----------------
DNA (2019bp)
protein (673aa)
id=5225050 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_81
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(110472..110948)
-----------------
DNA (477bp)
protein (159aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=2 Tax=Oligotropha carboxidovorans RepID=B6JD47_OLICO
glyoxalase/bleomycin resistance protein/dioxygenase
Putative ring-cleavage extradiol dioxygenase {ECO:0000313|EMBL:EIQ00665.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
ERMGT100_2_curated_scaffold_23_82
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(110945..111763)
-----------------
DNA (819bp)
protein (273aa)
alias=16ft_combo_ws3_scaffold_1578_39 id=24486232 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_83
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(111760..112404)
-----------------
DNA (645bp)
protein (215aa)
RNA polymerase sigma factor n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDP6_9DELT id=5224002 bin=16ft_combo_ws3_JS1 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_84
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(112473..114095)
-----------------
DNA (1623bp)
protein (541aa)
PAS/PAC Sensor Hybrid Histidine Kinase id=24486230 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Robiginitalea biformata genus=Robiginitalea taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative two-component hybrid sensor and regulator
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_85
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

114219..116174
-----------------
DNA (1956bp)
protein (652aa)
hypothetical protein id=24486229 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Amycolatopsis mediterranei genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_86
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(116150..116617)
-----------------
DNA (468bp)
protein (156aa)
GCN5-related N-acetyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024E8_SOLUE
N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABJ83628.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
ERMGT100_2_curated_scaffold_23_87
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

116703..117707
-----------------
DNA (1005bp)
protein (335aa)
Putative esterase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEJ0_THET1 id=5224005 bin=16ft_combo_ws3_JS1 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative esterase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_88
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

117704..118447
-----------------
DNA (744bp)
protein (248aa)
sulfate-transporting ATPase (EC:3.6.3.25)
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein id=24486227 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_89
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

118464..120056
-----------------
DNA (1593bp)
protein (531aa)
Uncharacterized protein n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U969_OCEP5 id=5224007 bin=16ft_combo_ws3_JS1 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_90
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120089..120457
-----------------
DNA (369bp)
protein (123aa)
Putative uncharacterized protein id=4124626 bin=GWC2_Planctomycetes_45_44 species=Nitrosomonas sp. AL212 genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying items 61-90 of 120 in total

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