ggKbase home page

ERMGT746_2_curated_scaffold_1155_8

Organism: ERMGT746_2_Deltaproteobacteria_64_16_curated

near complete RP 44 / 55 MC: 3 BSCG 48 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: comp(4157..4696)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface-associated sigma-54 modulation protein RaiA id=2013376 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 179.0
  • Bit_score: 331
  • Evalue 4.30e-88
sigma 54 modulation protein/ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 180.0
  • Bit_score: 150
  • Evalue 2.90e-34
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 179.0
  • Bit_score: 339
  • Evalue 2.90e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
GTGAACCAGATCAACGTGACGTTCCGGCATATCGACCCGAGCCAGGCATTGAAGGAGTACGTGACCGGGAAATTGGGAAAGATCGGGAAGGTGGTCGAAAAGTCGTTCGACGCGCACGTCACCTTGTCCGTCGAGAAGTACCGCCACATCGCCGAGGTGTTCCTGACGGCGCGGGGGATCACCATCAAGGCGTTCGAATCCACGGAAGACCTGTACTCCGCCATCGACCTCGTGTGCGACAAGGTCGAGCGCCAGTTGAAGAAGTACCGCGAGAAGCAGAAGGCCAAGGGGCAGGGGGTCCTCCCCGAGCCGATGGTGTCCGGATCGTCCCTCACGATCGCGGAGGGGGAAGGCCGGCCCAGGATCATCCACACGGACAACTTCCTGGCCAAGCCGATGACGGTGGAGGACGCGGCGCGCCACCTCGACATGCTCCGGCTCGACGTGGTGATGTTCGTGAACCAGGAGACGAACCAGCCGAGCGTGGTCTTCCGGCAGCAGGACGGCAACATCGGCTTCACGGAGCCGCCGGCTCGATGA
PROTEIN sequence
Length: 180
VNQINVTFRHIDPSQALKEYVTGKLGKIGKVVEKSFDAHVTLSVEKYRHIAEVFLTARGITIKAFESTEDLYSAIDLVCDKVERQLKKYREKQKAKGQGVLPEPMVSGSSLTIAEGEGRPRIIHTDNFLAKPMTVEDAARHLDMLRLDVVMFVNQETNQPSVVFRQQDGNIGFTEPPAR*