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ERMGT100_2_curated_scaffold_20

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Displaying items 61-77 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_20_61
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(73493..74671)
-----------------
DNA (1179bp)
protein (393aa)
Putative uncharacterized protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z6A3_9GAMM id=5224567 bin=16ft_combo_ws3_JS1 species=Thiorhodovibrio sp. 970 genus=Thiorhodovibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_20_62
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

74827..75663
-----------------
DNA (837bp)
protein (279aa)
Metallophosphoesterase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UQQ8_ROSS1 id=5224568 bin=16ft_combo_ws3_JS1 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
metallophosphoesterase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_20_63
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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75771..76265
-----------------
DNA (495bp)
protein (165aa)
Uncharacterized protein n=2 Tax=Rhodothermus marinus RepID=D0MJT0_RHOM4 id=5224569 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
thioredoxin domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_20_64
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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76271..76885
-----------------
DNA (615bp)
protein (205aa)
exonuclease; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] id=24475683 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative PAS/PAC sensor protein (EC:2.7.7.7)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_20_65
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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76938..77891
-----------------
DNA (954bp)
protein (318aa)
two component sigma54 specific Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator id=24475682 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
two component sigma54 specific Fis family transcriptional regulator
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_20_66
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

77978..78913
-----------------
DNA (936bp)
protein (312aa)
id=5224573 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_20_67
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(78921..80168)
-----------------
DNA (1248bp)
protein (416aa)
membrane protein n=1 Tax=Pontibacter roseus RepID=UPI000377D6E7
MgtC family protein {ECO:0000313|EMBL:EJF11222.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
membrane protein
ERMGT100_2_curated_scaffold_20_68
unknown

Not on your lists

comp(80165..81523)
-----------------
DNA (1359bp)
protein (453aa)
id=24595422 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ERMGT100_2_curated_scaffold_20_69
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

81909..82205
-----------------
DNA (297bp)
protein (99aa)
10 kDa chaperonin n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=CH10_DESAA id=5224574 bin=16ft_combo_ws3_JS1 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
groS; chaperone Hsp10 (GroES), part of GroE chaperone system
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_20_70
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

82293..83945
-----------------
DNA (1653bp)
protein (551aa)
60 kDa chaperonin n=2 Tax=Methylacidiphilum RepID=CH60_METI4 id=5224575 bin=16ft_combo_ws3_JS1 species=unknown genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
groEL; chaperonin GroEL
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_20_71
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(84071..84796)
-----------------
DNA (726bp)
protein (242aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003478084
Ankyrin {ECO:0000313|EMBL:KER81086.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
antirepressor regulating drug resistance protein
ERMGT100_2_curated_scaffold_20_72
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(84945..85727)
-----------------
DNA (783bp)
protein (261aa)
NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGW9_ANADF
NADH ubiquinone oxidoreductase 20 kDa subunit
Tax=GWD2_Desulfuromonadales_61_12_curated
ERMGT100_2_curated_scaffold_20_73
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(85727..87238)
-----------------
DNA (1512bp)
protein (504aa)
NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGW8_ANADF
NADH-ubiquinone oxidoreductase chain 49kDa
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMGT100_2_curated_scaffold_20_74
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(87235..88656)
-----------------
DNA (1422bp)
protein (474aa)
Ech-hydrogenase-related complex, HyfF-like integral membrane subunit n=2 Tax=Geobacter metallireducens RepID=Q39YQ9_GEOMG
ehrD-2; Ech-hydrogenase-related complex, HyfF-like integral membrane subunit
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMGT100_2_curated_scaffold_20_75
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(88656..89294)
-----------------
DNA (639bp)
protein (213aa)
NAD-dependent dehydrogenase subunit n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IFR4_ANADE
NAD-dependent dehydrogenase subunit
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMGT100_2_curated_scaffold_20_76
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(89304..90215)
-----------------
DNA (912bp)
protein (304aa)
Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IFR5_ANADE
respiratory-chain NADH dehydrogenase, subunit 1
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMGT100_2_curated_scaffold_20_77
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(90212..91063)
-----------------
DNA (852bp)
protein (284aa)
Ech-hydrogenase-related complex, NuoL-like integral membrane lipoprotein subunit n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74F75_GEOSL
ehrA-2; Ech-hydrogenase-related complex, NuoL-like integral membrane lipoprotein subunit
Tax=GWC2_Gemmatimonadetes_71_10_curated
Displaying items 61-77 of 77 in total

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