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ERMGT100_2_curated_scaffold_47

Search features with annotation key words

Displaying items 31-60 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_47_31
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

14040..15035
-----------------
DNA (996bp)
protein (332aa)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=RPOA_SYNFM id=5223086 bin=16ft_combo_ws3_JS1 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
DNA-directed RNA polymerase subunit alpha
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_47_32
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists


15049..15621
-----------------
DNA (573bp)
protein (191aa)
50S ribosomal protein L17 n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RS27_SPHGB id=5223085 bin=16ft_combo_ws3_JS1 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
50S ribosomal protein L17
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_47_33
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

15737..16915
-----------------
DNA (1179bp)
protein (393aa)
Uncharacterized protein n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CH72_KOSOT id=5223084 bin=16ft_combo_ws3_JS1 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_47_34
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

16927..18801
-----------------
DNA (1875bp)
protein (625aa)
GTP-binding protein TypA/BipA n=3 Tax=Sulfurihydrogenibium RepID=C1DXB2_SULAA id=5223083 bin=16ft_combo_ws3_JS1 species=unknown genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
GTP-binding protein TypA/BipA
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_47_35
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

18846..21953
-----------------
DNA (3108bp)
protein (1036aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3) id=24426616 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Actinokineospora enzanensis genus=Actinokineospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
barA; sensory box histidine kinase/response regulator (EC:2.7.13.3)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_47_36
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

21950..22351
-----------------
DNA (402bp)
protein (134aa)
divK; cell division response regulator DivK/Rre42 id=24426617 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
response regulator receiver protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_47_37
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

22348..22854
-----------------
DNA (507bp)
protein (169aa)
two-component response receiver and regulator protein (EC:3.1.1.61) id=24426618 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
response regulator
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_47_38
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

22936..23712
-----------------
DNA (777bp)
protein (259aa)
carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] id=24426619 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
dienelactone hydrolase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_47_39
GWB2_Elusimicrobia_63_22_curated, Elusimicrobia, Bacteria

Not on your lists

23709..24794
-----------------
DNA (1086bp)
protein (362aa)
Putative uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FJE5_SORC5 id=5223077 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
epimerase
Tax=GWB2_Elusimicrobia_63_22_curated
ERMGT100_2_curated_scaffold_47_trna_1
unknown

Not on your lists

24881..24952
-----------------
DNA (72bp)
transferRNA Asn
ERMGT100_2_curated_scaffold_47_40
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25005..25529
-----------------
DNA (525bp)
protein (175aa)
Acetyltransferase n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EYQ5_9CYAN
Acetyltransferase {ECO:0000313|EMBL:EKV00992.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
N-acetyltransferase GCN5
ERMGT100_2_curated_scaffold_47_41
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25526..25729
-----------------
DNA (204bp)
protein (68aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00036E486D
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMGT100_2_curated_scaffold_47_42
unknown

Not on your lists

comp(26076..26567)
-----------------
DNA (492bp)
protein (164aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_47_43
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

Not on your lists

27032..29110
-----------------
DNA (2079bp)
protein (693aa)
Putative multicopper oxidase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K049_CLOPA
putative multicopper oxidase
Tax=RBG_16_Zixibacteria_40_9_curated
ERMGT100_2_curated_scaffold_47_44
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

29196..30905
-----------------
DNA (1710bp)
protein (570aa)
FG-GAP repeat domain protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZP22_9BACT id=5224880 bin=16ft_combo_ws3_JS1 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_47_45
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30981..31763)
-----------------
DNA (783bp)
protein (261aa)
Dienelactone hydrolase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAS4_ANADF
dienelactone hydrolase
Dienelactone hydrolase {ECO:0000313|EMBL:ABS25820.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
ERMGT100_2_curated_scaffold_47_46
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

comp(31775..33190)
-----------------
DNA (1416bp)
protein (472aa)
FAD-linked oxidase n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2LF00_9GAMM
FAD-linked oxidase
Tax=RBG_13_Caldithrix_44_9_curated
ERMGT100_2_curated_scaffold_47_47
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33306..34640)
-----------------
DNA (1335bp)
protein (445aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
Two-component sensor PilS n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NZA2_9DELT
ATP-binding region ATPase domain protein
ERMGT100_2_curated_scaffold_47_48
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(34630..36015)
-----------------
DNA (1386bp)
protein (462aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CWG7_MYXXD
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMGT100_2_curated_scaffold_47_49
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(36048..37154)
-----------------
DNA (1107bp)
protein (369aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01V08_SOLUE
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABJ86507.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
ERMGT100_2_curated_scaffold_47_50
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37201..39615)
-----------------
DNA (2415bp)
protein (805aa)
ABC transporter permease n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7ULX3_MYXSD
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AGC49013.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
ERMGT100_2_curated_scaffold_47_51
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(39615..40355)
-----------------
DNA (741bp)
protein (247aa)
ABC transporter related n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SG5_SOLUE
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABJ87405.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
ERMGT100_2_curated_scaffold_47_52
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(40405..41646)
-----------------
DNA (1242bp)
protein (414aa)
RND family efflux transporter MFP subunit n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CNM7_MYXFH
RND family efflux transporter MFP subunit
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMGT100_2_curated_scaffold_47_53
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

42020..44140
-----------------
DNA (2121bp)
protein (707aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V2J4_TERSS id=5223833 bin=16ft_combo_ws3_JS1 species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_47_54
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

44271..44774
-----------------
DNA (504bp)
protein (168aa)
id=5223834 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_47_55
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44962..45483)
-----------------
DNA (522bp)
protein (174aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3P1_GEODF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM21462.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
ERMGT100_2_curated_scaffold_47_56
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(45620..46972)
-----------------
DNA (1353bp)
protein (451aa)
Putative uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCH0_9BACT id=5225680 bin=16ft_combo_ws3_JS1 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_47_57
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

47080..47319
-----------------
DNA (240bp)
protein (80aa)
Tetratricopeptide repeat domain protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08MW6_STIAD id=5225443 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_47_58
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

47347..48462
-----------------
DNA (1116bp)
protein (372aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=L9KB64_9DELT id=5225444 bin=16ft_combo_ws3_JS1 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_47_59
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(48464..50167)
-----------------
DNA (1704bp)
protein (568aa)
hypothetical protein Lwei2_07741 id=4940737 bin=GWC2_Ignavibacteria_56_12 species=Leptospira noguchii genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Displaying items 31-60 of 64 in total

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