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ERMGT400_2_curated_scaffold_520_1

Organism: ERMGT400_2_Nitrospirae_58_15_curated

partial RP 42 / 55 MC: 4 BSCG 40 / 51 MC: 3 ASCG 9 / 38
Location: 2..2269

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 754.0
  • Bit_score: 1196
  • Evalue 0.0
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969, ECO:0000313|EMBL:CBK43979.1}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 754.0
  • Bit_score: 1196
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8Z7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 754.0
  • Bit_score: 1196
  • Evalue 0.0

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Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 2268
CTGGCACTCTTACGCGAACACGATGTGCCGGCGACGGAATGGACAGTGGGGGCCTGGACCGCCTCCAGTAAAACCAAACCGCCGTTTTACGTCTTGCACGGCGATTTGTCCGCGGGATTCCTTGCACCGGACTTGCGCTTGGCCGTTCTGACGGAAGAAGAACTGTTTGCCAAAGGCGCGCGCCATAAGCCGCAAGTCAAGAGTAAAGCCGCGACCTTCCTCTCCTCGCTGGAAGATCTTAACGTGGGCGACTACGTCGTCCACGTCCAACATGGCATCGCCAAATATCAAGGCCTCAAACGCCTCTCGGTGCAAGACTTCGACAGCGATTATTTGGTCCTGGAATTCGCCGGTGGCGACACGCTGTACGTCCCGCTGGAGCGGCTCAACCATGTGCAGCGGTATAGCGGGGCAGAGGGCCATGCGCCGCGCCTTGAACGTTTGGGCGGCACCAGTTGGGCCAAAACGACCGCGCGCGTGAAGCAAGACATCGAGGAGATGGCCCACGAGTTGGTTGACCTCTATGCCAACCGTGAACTCGTGACGCGCCATGCCTATGGGTTCGACAGCACGATGTACCACGAGTTCGAAGCCGCGTTTGAGTATGAAGAAACAGCGGATCAACTCAAAGCGATCGAAGACATTACGCACGACATGGAGTCCAGAAAACCGATGGACCGCCTGGTCTGTGGCGACGTCGGGTACGGAAAAACGGAAGTGGCCATGCGAGCAGCCTTCAAGGCAGTGGAAGATAATCGCCAGGTGGCGGTGCTCGTCCCGACAACCCTGTTGGCGCACCAACATTACGACAACTTCTCAGAACGGTTTGCGCCGTTTCCGGCTCGCGTGGCCTTGCTCTCACGATTCCAATCGCCGAAGGAGGCCAAGGCCATTCTCAAAGACGTGGCAGCCGGAACCATCGACGTGGTGATCGGAACACACCGGCTCATCCAGAAGGATGTGGTGTTCCGCGATCTGGGCCTGGTGATCATTGACGAAGAACAGTGGTTCGGCGTCAAACACAAGGAACGATTAAAGCAACTCCGCACTCAAGTCGACGTCTTGACACTCACGGCCACCCCAATTCCTCGCACCTTGCAGATGGCTATGGCGAGCGTGCGCGATCTCTCGATCATCGAAACCCCCCCGGCGGGCCGCCTGTCCATTCGCACACAGGTCGTCCGATCGAGCGACACGCTCATCCGAGAGGCGATCTTGCGCGAACTGGGGCGGGGCGGGCAGGTCTACTTCGTCCATAACCGAGTCGAAACGATGGAGAAAACGGGATCTTGGCTCCAACAACTGGTGCCCGACGCGCGCATCGTGATGGCCCATGGGCAGATGAATGCCAAACCGCTCGAAGCCGTGATGTTGAAATTCTTTCGCCGAGAAGCGGATGTGTTGATCGCCTCGTCCATTATCCAATCGGGCATCGACGTGCCCCATGCCAACACGATCTTCGTCAATCGTGCTGACATGTTCGGCCTCGCGCAGTTGTACCAATTGCGCGGGCGCGTGGGACGAAGCGGCGACCAAGCCTACGCCTACTTCCTGGTCCCCGATGAGGGACGGTTAAGCGAAGACGCTCAGAAGCGCCTCACCGCTATTCAGCAATTTACCGAACTGGGCGCCGGCTTCCGCATCGCCGCGGCGGATATGGAAATCCGTGGCGCCGGCAACCTTCTCGGGAAACAACAATCTGGACATATCGCTGCCATCGGACTCGATCTGTACATGCAGATGGTGGAGCAGGCCGTCCAGCGCCTCAAAGGCCAGGTGGTGGAAGAAGAGCCGGACCCCACCCTCCGGCTCAATGTCTCCGCCTTTATTCCGGATGACTACGTCGCCGATCCCCACCAGCGCCTCTCGTGCTACAAACGACTCTCCTCCTGCGCCCAAGTCGGAGATCTCGCCTTACTCCATGGCGAAATACAGGATCGGTATGGGCTGGCCCCGAACTCCGTCGAGCGACTGTTCGAAGTCATGCAGGTGCGGATCCAGGCCAAGGCCTTGCGCCTGAACGCGATCGAACTCAAGACCCACTCCGTCGTCGTCACGCTCGACGCCAAGAGCCGGATCTCGAGCCAAGCGATTCACCGGATGATGGACCAGTACAAGAAGCGGATTTGCTTCCTGTCTCCGCTCTCGTTCGAGCTCCAGATGCCGCATCAGGACTGGTCTTCCATCTTTCGAGAACTCACCGCAACCTTGCAAAGCCTGGGAGGCTGTGATACCAAGACCAAGAGGTCCCCGCAATCATCTCGCTAA
PROTEIN sequence
Length: 756
LALLREHDVPATEWTVGAWTASSKTKPPFYVLHGDLSAGFLAPDLRLAVLTEEELFAKGARHKPQVKSKAATFLSSLEDLNVGDYVVHVQHGIAKYQGLKRLSVQDFDSDYLVLEFAGGDTLYVPLERLNHVQRYSGAEGHAPRLERLGGTSWAKTTARVKQDIEEMAHELVDLYANRELVTRHAYGFDSTMYHEFEAAFEYEETADQLKAIEDITHDMESRKPMDRLVCGDVGYGKTEVAMRAAFKAVEDNRQVAVLVPTTLLAHQHYDNFSERFAPFPARVALLSRFQSPKEAKAILKDVAAGTIDVVIGTHRLIQKDVVFRDLGLVIIDEEQWFGVKHKERLKQLRTQVDVLTLTATPIPRTLQMAMASVRDLSIIETPPAGRLSIRTQVVRSSDTLIREAILRELGRGGQVYFVHNRVETMEKTGSWLQQLVPDARIVMAHGQMNAKPLEAVMLKFFRREADVLIASSIIQSGIDVPHANTIFVNRADMFGLAQLYQLRGRVGRSGDQAYAYFLVPDEGRLSEDAQKRLTAIQQFTELGAGFRIAAADMEIRGAGNLLGKQQSGHIAAIGLDLYMQMVEQAVQRLKGQVVEEEPDPTLRLNVSAFIPDDYVADPHQRLSCYKRLSSCAQVGDLALLHGEIQDRYGLAPNSVERLFEVMQVRIQAKALRLNAIELKTHSVVVTLDAKSRISSQAIHRMMDQYKKRICFLSPLSFELQMPHQDWSSIFRELTATLQSLGGCDTKTKRSPQSSR*