ggKbase home page

ERMGT500_2_curated_scaffold_56

Search features with annotation key words

Displaying items 31-60 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT500_2_curated_scaffold_56_31
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29085..29282
-----------------
DNA (198bp)
protein (66aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1B9G8_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMGT500_2_curated_scaffold_56_32
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29579..30841)
-----------------
DNA (1263bp)
protein (421aa)
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000313|EMBL:AFU46055.1}; EC=4.2.1.33 {ECO:0000313|EMBL:AFU46055.1};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Variovorax paradoxus RepID=UPI000376ADFD
ERMGT500_2_curated_scaffold_56_33
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30842..31555)
-----------------
DNA (714bp)
protein (238aa)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:EUC15663.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EUC15663.1};; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Burkholderia sp. BT03 RepID=J2S7P5_9BURK
ABC transporter
ERMGT500_2_curated_scaffold_56_34
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31548..32303)
-----------------
DNA (756bp)
protein (252aa)
ABC transporter related n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CME7_VARPS
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACS17448.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
ERMGT500_2_curated_scaffold_56_35
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32320..33255)
-----------------
DNA (936bp)
protein (312aa)
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00035CAD15
inner-membrane translocator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
ERMGT500_2_curated_scaffold_56_36
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33252..34067)
-----------------
DNA (816bp)
protein (272aa)
Candidate ABC type branched chain amino acid transport systems, permease component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWI9_RAMTT
branched chain amino acid ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
ERMGT500_2_curated_scaffold_56_37
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34088..35188)
-----------------
DNA (1101bp)
protein (367aa)
Extracellular ligand-binding receptor n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4J0_9BURK
extracellular ligand-binding receptor
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
ERMGT500_2_curated_scaffold_56_38
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35270..36376
-----------------
DNA (1107bp)
protein (369aa)
alcohol dehydrogenase n=1 Tax=Massilia niastensis RepID=UPI00037A6E98
adh; alcohol dehydrogenase adh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_56_39
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(36515..37540)
-----------------
DNA (1026bp)
protein (342aa)
Uncharacterized protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CQ94_TRURR
hypothetical protein
Tax=RBG_16_NC10_65_8_curated
ERMGT500_2_curated_scaffold_56_40
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(37711..38085)
-----------------
DNA (375bp)
protein (125aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XWF9_9ACTO
Tax=RBG_16_NC10_65_8_curated
ERMGT500_2_curated_scaffold_56_41
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38501..39205)
-----------------
DNA (705bp)
protein (235aa)
Branched-chain amino acid transport ATP-binding protein LivF n=1 Tax=Rhodovulum sp. PH10 RepID=J6UAW7_9RHOB
ABC-type branched-chain amino acid transport systems, ATPase component
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT500_2_curated_scaffold_56_42
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39205..39933)
-----------------
DNA (729bp)
protein (243aa)
Putative branched-chain amino acid ABC transporter, ATP-binding component (LivG-like) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZAN7_AZOL4
putative branched-chain amino acid ABC transporter, ATP-binding component (livG-like)
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_56_43
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39942..40925)
-----------------
DNA (984bp)
protein (328aa)
Putative branched-chain amino acid ABC transporter, permease component (LivM-like) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ARN5_AZOBR
branched-chain amino acid ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT500_2_curated_scaffold_56_44
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40922..41791)
-----------------
DNA (870bp)
protein (290aa)
Branched-chain amino acid transport system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P083_AZOS1
livH; branched-chain amino acid transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT500_2_curated_scaffold_56_45
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41847..43091)
-----------------
DNA (1245bp)
protein (415aa)
Branched-chain amino acid transport system substrate-binding protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ARP0_AZOBR
livK; branched-chain amino acid transport system substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT500_2_curated_scaffold_56_46
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43205..43687
-----------------
DNA (483bp)
protein (161aa)
regulatory protein MarR id=12551174 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
MarR family transcriptional regulator
Tax=RBG_16_Betaproteobacteria_66_20_curated
ERMGT500_2_curated_scaffold_56_47
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43699..45564
-----------------
DNA (1866bp)
protein (622aa)
Feruloyl-CoA synthase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z9I3_9PROT
feruloyl-CoA synthase
Tax=GWA2_Rhodocyclales_65_20_curated
ERMGT500_2_curated_scaffold_56_48
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45606..47444)
-----------------
DNA (1839bp)
protein (613aa)
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI00036EE8E2
MORN motif family protein
MORN motif family protein {ECO:0000313|EMBL:AIY41193.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
ERMGT500_2_curated_scaffold_56_49
unknown

Not on your lists

comp(47459..48025)
-----------------
DNA (567bp)
protein (189aa)

This feature has no annotations

ERMGT500_2_curated_scaffold_56_50
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48117..49109)
-----------------
DNA (993bp)
protein (331aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002FE4903
4,5-dihydroxyphthalate decarboxylase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMGT500_2_curated_scaffold_56_51
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49244..50527)
-----------------
DNA (1284bp)
protein (428aa)
Rieske (2Fe-2S) domain-containing protein n=1 Tax=Burkholderia sp. RPE64 RepID=R4WRV1_9BURK
rieske (2Fe-2S) domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_56_52
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50557..51537)
-----------------
DNA (981bp)
protein (327aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035FA0B6
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMGT500_2_curated_scaffold_56_53
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51676..52236
-----------------
DNA (561bp)
protein (187aa)
Uncharacterized protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CPB8_9BURK
putative Carbon monoxide dehydrogenase, coxG accessory protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMGT500_2_curated_scaffold_56_54
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(52243..53361)
-----------------
DNA (1119bp)
protein (373aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KQS7_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMGT500_2_curated_scaffold_56_55
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(53391..55028)
-----------------
DNA (1638bp)
protein (546aa)
malate synthase A (EC:2.3.3.9)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
Malate synthase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WWP1_KYRT2
ERMGT500_2_curated_scaffold_56_56
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55100..56662
-----------------
DNA (1563bp)
protein (521aa)
XRE family transcriptional regulator (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BYA6_9ZZZZ
transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT500_2_curated_scaffold_56_57
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56840..57658)
-----------------
DNA (819bp)
protein (273aa)
Peptidase U62, modulator of DNA gyrase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B1Y6_9PROT
peptidase U62, modulator of DNA gyrase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMGT500_2_curated_scaffold_56_58
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58184..58693
-----------------
DNA (510bp)
protein (170aa)
UPF0307 protein NAL212_3079 n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZDD7_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT500_2_curated_scaffold_56_59
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58680..59279
-----------------
DNA (600bp)
protein (200aa)
Molybdopterin biosynthesis mog protein n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RF75_9RHOO
mogA; molybdenum cofactor synthesis domain containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT500_2_curated_scaffold_56_60
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59315..59977
-----------------
DNA (663bp)
protein (221aa)
carboxylesterase (EC:3.1.1.1)
Carboxylesterase id=3732186 bin=GWA2_Methylomirabilis_73_35 species=Alcaligenes faecalis genus=Alcaligenes taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Displaying items 31-60 of 96 in total

View Taxonomy