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ERMGT500_2_curated_scaffold_116

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT500_2_curated_scaffold_116_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..126
-----------------
DNA (126bp)
protein (42aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036A83E3
LuxR family two component transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMGT500_2_curated_scaffold_116_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(316..867)
-----------------
DNA (552bp)
protein (184aa)
Uncharacterized protein n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H371_METFK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_116_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1180..1377)
-----------------
DNA (198bp)
protein (66aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_116_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1540..2505
-----------------
DNA (966bp)
protein (322aa)
Transcriptional regulator n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IQL7_9BURK
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_116_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2605..3813)
-----------------
DNA (1209bp)
protein (403aa)
MFS transporter n=1 Tax=Pseudomonas thermotolerans RepID=UPI00037A04A2
major facilitator superfamily transporter
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_116_trna_1
unknown

Not on your lists

3980..4052
-----------------
DNA (73bp)
transferRNA Lys
ERMGT500_2_curated_scaffold_116_6
unknown

Not on your lists

4113..4250
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

ERMGT500_2_curated_scaffold_116_trna_2
unknown

Not on your lists

4151..4224
-----------------
DNA (74bp)
transferRNA Pro
ERMGT500_2_curated_scaffold_116_7
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4351..5547
-----------------
DNA (1197bp)
protein (399aa)
RTCB protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003608237
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_116_8
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5717..6409
-----------------
DNA (693bp)
protein (231aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZGV9_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ13841.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
ERMGT500_2_curated_scaffold_116_9
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6460..7164)
-----------------
DNA (705bp)
protein (235aa)
Putative uncharacterized protein n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QLL6_METS6
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_116_10
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7277..7897)
-----------------
DNA (621bp)
protein (207aa)
Glutathione S-transferase-like protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZG2_RUBXD
glutathione S-transferase-like protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_116_11
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8001..8999)
-----------------
DNA (999bp)
protein (333aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CMF3_VARPS
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMGT500_2_curated_scaffold_116_12
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9038..9487)
-----------------
DNA (450bp)
protein (150aa)
Carbon monoxide dehydrogenase n=1 Tax=Ralstonia sp. AU12-08 RepID=S9T7F9_9RALS
Putative Carbon monoxide dehydrogenase, coxG accessory protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_116_13
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9718..10713
-----------------
DNA (996bp)
protein (332aa)
XdhC/CoxI family protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKM8_RUBGI
XdhC/CoxI family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_116_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10907..11596
-----------------
DNA (690bp)
protein (230aa)
UPF0301 protein Rmar_0197 id=4327963 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT500_2_curated_scaffold_116_15
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11593..12408
-----------------
DNA (816bp)
protein (272aa)
L-aspartate dehydrogenase (EC:1.4.1.21)
Putative L-aspartate dehydrogenase n=1 Tax=Clostridium ultunense Esp RepID=M1Z5S5_9CLOT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_116_16
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12546..13235
-----------------
DNA (690bp)
protein (230aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D59430
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_116_17
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13262..14068
-----------------
DNA (807bp)
protein (269aa)
hypothetical protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002EEB8D4
hydrolase, beta-lactamase-like
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_116_18
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14103..14945
-----------------
DNA (843bp)
protein (281aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUU0_9BURK
NUDIX hydrolase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_116_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15000..16025)
-----------------
DNA (1026bp)
protein (342aa)
Extra-cytoplasmic solute receptor family protein 110 n=2 Tax=Alicycliphilus denitrificans RepID=F4GBX6_ALIDK
extra-cytoplasmic solute receptor family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT500_2_curated_scaffold_116_20
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16084..17487)
-----------------
DNA (1404bp)
protein (468aa)
prpD4; 2-methylcitrate dehydratase (EC:4.2.1.79)
2-Methylcitrate dehydratase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K192_CUPNH
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_116_21
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17642..19114
-----------------
DNA (1473bp)
protein (491aa)
Putative fumarate reductase flavoprotein subunit n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13JS6_BURXL
tricarballylate dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_116_22
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19167..20285)
-----------------
DNA (1119bp)
protein (373aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21ZU9_RHOFD
major facilitator transporter
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_116_23
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20347..20826)
-----------------
DNA (480bp)
protein (160aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BYS6_NITHN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_116_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20989..22227
-----------------
DNA (1239bp)
protein (413aa)
(S)-mandelate dehydrogenase n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FBA0_9ALTE
mdlB; (S)-mandelate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT500_2_curated_scaffold_116_25
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22307..23482
-----------------
DNA (1176bp)
protein (392aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5J0F8_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_116_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23667..24656)
-----------------
DNA (990bp)
protein (330aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GXC2_CUPNN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT500_2_curated_scaffold_116_27
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24661..25317)
-----------------
DNA (657bp)
protein (219aa)
Carboxymuconolactone decarboxylase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTA4_ACIC1
carboxymuconolactone decarboxylase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT500_2_curated_scaffold_116_28
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25501..26001)
-----------------
DNA (501bp)
protein (167aa)
77 permeases of the major facilitator superfamily id=4901906 bin=GWC2_Syntrophus__56_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Displaying 30 items

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