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PLM4_65_b1_redo_sep16_scaffold_40438_3

Organism: PLM4_65_b1_sep16_Deltaproteobacteria_57_7

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 1364..1729

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 factor interaction domain-containing protein Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SRL4_PLAL2 similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 121.0
  • Bit_score: 87
  • Evalue 5.60e-15
sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 121.0
  • Bit_score: 87
  • Evalue 1.60e-15
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:ADG66548.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 121.0
  • Bit_score: 87
  • Evalue 7.90e-15

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 366
TTGCCGGCTCGCCGGTCGGTCCTTGCCGTCGATGATGAAGAGAATTTCTTGACGCTTCTCAATTGGTTTCTCACTCAGAGGGGGTATCAGGTTTACACCGCTTCGCACGTGGCCGAAGCATTGCTGTTCGCCCGAGAGCGAACTTTCGACATCGCCTTACTCGATATCAAGCTCGGAACCGGCAATGATGGAATGTTCTTATTGGATGAATTGACTCAGCGCCTCCCAAAAATCAAAGTCATCATGATGACGGCATTTCCGACCGTTTCTGCGATCACGCGCGCCTTTGACAAAGGAGCCGCGCGCTTTTTGACGAAGCCGGTGGATCTCCAGGAGCTCTCAGAAGCGATTAAAACACTCCTTTAG
PROTEIN sequence
Length: 122
LPARRSVLAVDDEENFLTLLNWFLTQRGYQVYTASHVAEALLFARERTFDIALLDIKLGTGNDGMFLLDELTQRLPKIKVIMMTAFPTVSAITRAFDKGAARFLTKPVDLQELSEAIKTLL*