ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_70929_3

Organism: PLM4_65_b1_sep16_Deltaproteobacteria_57_7

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(2237..3313)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase bin=GWC2_Deltaproteobacteria_55_46 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 351.0
  • Bit_score: 445
  • Evalue 3.10e-122
leuA; 2-isopropylmalate synthase similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 344.0
  • Bit_score: 412
  • Evalue 6.40e-113
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 358.0
  • Bit_score: 611
  • Evalue 6.00e-172

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
ATCCGCGCCGGGGCGAAAGTTATCAACGTGCCCGACACCACCGGTTACGCGATCCCGTCGGAATTCGGCGCCCTGGTGGCGAATTTGATCGAACGCACCGCCGGCGGCGACCGGGTGATCTGGAGCGCCCACTGCCACAATGATTTGGGACTTGCGGTGGCCAATTCTCTCGCCGCCGTTCATAACGGCGCCCGGCAGATCGAGTGCACGATCAACGGCATCGGCGAGCGCGCCGGCAATACTTCCTTGGAAGAAGTCGTCATGGCGCTCAGGACGCGAAAAAATTATCTCGATCTCGACACCAACATTACCAGCGAGCAGCTCTATCCAACCTCGCGTCTGGTGTCTCAGGTGACCGGGATCGCGATTCCGATCAATAAGCCTGTGGTAGGTGACAACGCGTTCGCGCACGAGGCGGGCATCCATCAAGACGGCGTGCTCAAGCACAAGCAGACCTACGAGATCATGACGCCGGAGTCGATCGGCATTCCCGGCAACCGGCTGGTGATGGGCAAGCACTCCGGGCGCCACGCCTTCGACGAGCGGCTGAAGCACTTGGGCTTCAATCTGAGCAAGGAAGACATGAATCGCGCGTTCGTGCGCTTCAAAGAGCTCGCCGACAAAAAGAAGAACGTCTATGACGAAGACATCGAGGCGATCGTTGCCGAGGAGATTCTCCGCGTGCCCGGCCGGCCGGATAAGTTCGAACTGCTCTACATGAACGTGAATTCGAGCTCCGACGGCATTCCCTCGGCGACGGTGAAAATGCGCGTCGACGGCGGCGAAGTCACGGATCACGCGTCGGGCGACGGCGTCGTCGACGCTTGCTATAAGGTCATTACTAAAATCACCGGGTCGCAGTCGCAGTTGGTGCGTTATTCGGTCAACGCGATCACCGGGGGCACGGACGCGCAAGGCGAAGTGTCCTGCTTGATCGAGGACGACGGCATTCGCGTGTCCGGGCAGGGAGCGCACACGGATATCATCATGGCGAGCGCCTTGGCGTACATCAACGCGCTCAATAAATTGGAAGGAAGGAAACACTATCGGCAGGTGGTGGAGAAAGAGGGACCATGA
PROTEIN sequence
Length: 359
IRAGAKVINVPDTTGYAIPSEFGALVANLIERTAGGDRVIWSAHCHNDLGLAVANSLAAVHNGARQIECTINGIGERAGNTSLEEVVMALRTRKNYLDLDTNITSEQLYPTSRLVSQVTGIAIPINKPVVGDNAFAHEAGIHQDGVLKHKQTYEIMTPESIGIPGNRLVMGKHSGRHAFDERLKHLGFNLSKEDMNRAFVRFKELADKKKNVYDEDIEAIVAEEILRVPGRPDKFELLYMNVNSSSDGIPSATVKMRVDGGEVTDHASGDGVVDACYKVITKITGSQSQLVRYSVNAITGGTDAQGEVSCLIEDDGIRVSGQGAHTDIIMASALAYINALNKLEGRKHYRQVVEKEGP*