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PLM4_65_b1_sep16_Deltaproteobacteria_57_7

PLM4_65cm_b1_redo_sep2016_Deltaproteobacteria_57_7
In projects: PLM4_65cm_b1_redo_sep2016  |  ERML-PLM4  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 51-100 of 882 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_65_b1_redo_sep16_scaffold_6252
Domain: Bacteria (100%)
10 12509 bp 61.75 9.32 97.18
PLM4_65_b1_redo_sep16_scaffold_35568
Species: RLO_Deltaproteobacteria_60_19 (60%)
5 4941 bp 59.64 6.01 97.02
PLM4_65_b1_redo_sep16_scaffold_13288
Class: Deltaproteobacteria (100%)
6 8454 bp 55.02 7.11 97.02
PLM4_65_b1_redo_sep16_scaffold_57595
Class: Deltaproteobacteria (60%)
5 5309 bp 58.13 8.28 96.97
PLM4_65_b1_redo_sep16_scaffold_39986
Species: RLO_Deltaproteobacteria_60_19 (71.43%)
7 7909 bp 59.26 6.87 96.88
PLM4_65_b1_redo_sep16_scaffold_33474
Class: Deltaproteobacteria (100%)
4 5107 bp 58.53 7.81 96.87
PLM4_65_b1_redo_sep16_scaffold_38068
Class: Deltaproteobacteria (80%)
5 4753 bp 58.78 7.64 96.82
PLM4_65_b1_redo_sep16_scaffold_102331
Species: Sphaerobacter thermophilus (66.67%)
3 2668 bp 57.16 7.03 96.81
PLM4_65_b1_redo_sep16_scaffold_176845
Domain: Bacteria (50%)
4 3256 bp 57.99 6.45 96.74
PLM4_65_b1_redo_sep16_scaffold_68355
Species: RLO_Deltaproteobacteria_60_19 (75%)
4 3388 bp 57.79 7.39 96.69
PLM4_65_b1_redo_sep16_scaffold_80565
Class: Deltaproteobacteria (100%)
3 3075 bp 56.33 7.66 96.68
PLM4_65_b1_redo_sep16_scaffold_137297
Class: Deltaproteobacteria (75%)
4 3576 bp 54.42 6.84 96.64
PLM4_65_b1_redo_sep16_scaffold_25568
Class: Deltaproteobacteria (60%)
5 5912 bp 54.45 7.46 96.57
PLM4_65_b1_redo_sep16_scaffold_33433
Class: Deltaproteobacteria (85.71%)
7 5391 bp 57.48 7.46 96.49
PLM4_65_b1_redo_sep16_scaffold_42726
Species: RLO_Deltaproteobacteria_60_19 (50%)
4 4453 bp 58.75 6.00 96.47
PLM4_65_b1_redo_sep16_scaffold_22314
Species: RLO_Deltaproteobacteria_60_19 (66.67%)
3 6381 bp 57.33 8.82 96.47
PLM4_65_b1_redo_sep16_scaffold_88265
Class: Oscillatoriophycideae (66.67%)
3 3767 bp 52.69 8.92 96.44
PLM4_65_b1_redo_sep16_scaffold_13801
Class: Deltaproteobacteria (71.43%)
7 8289 bp 58.62 7.65 96.34
PLM4_65_b1_redo_sep16_scaffold_70929
Species: RLO_Deltaproteobacteria_60_19 (100%)
3 3314 bp 59.20 7.47 96.32
PLM4_65_b1_redo_sep16_scaffold_7769
Class: Deltaproteobacteria (50%)
12 11651 bp 55.13 6.15 96.28
PLM4_65_b1_redo_sep16_scaffold_73870
Species: RLO_Deltaproteobacteria_60_19 (50%)
4 3236 bp 57.57 6.72 96.23
PLM4_65_b1_redo_sep16_scaffold_95066
Species: RLO_Deltaproteobacteria_57_22 (50%)
4 2787 bp 56.62 6.94 96.02
PLM4_65_b1_redo_sep16_scaffold_88420
Species: RLO_Deltaproteobacteria_60_16 (50%)
4 2909 bp 57.13 5.57 96.01
PLM4_65_b1_redo_sep16_scaffold_78752
Species: RLO_Deltaproteobacteria_60_16 (66.67%)
3 3117 bp 58.55 7.65 95.86
PLM4_65_b1_redo_sep16_scaffold_48234
Species: RLO_Deltaproteobacteria_60_19 (50%)
4 4150 bp 57.54 7.19 95.86
PLM4_65_b1_redo_sep16_scaffold_54935
Species: RLO_Deltaproteobacteria_57_22 (80%)
5 3845 bp 59.14 6.79 95.81
PLM4_65_b1_redo_sep16_scaffold_26222
Order: Burkholderiales (55.56%)
9 5834 bp 57.11 5.58 95.75
PLM4_65_b1_redo_sep16_scaffold_88780
Class: Deltaproteobacteria (100%)
3 2902 bp 55.79 8.22 95.73
PLM4_65_b1_redo_sep16_scaffold_77139
Species: RLO_Deltaproteobacteria_60_19 (75%)
4 3156 bp 56.08 6.61 95.72
PLM4_65_b1_redo_sep16_scaffold_42591
Class: Deltaproteobacteria (50%)
6 4460 bp 58.14 8.14 95.72
PLM4_65_b1_redo_sep16_scaffold_6469
Class: Deltaproteobacteria (70%)
10 12302 bp 58.44 7.38 95.67
PLM4_65_b1_redo_sep16_scaffold_57307
Species: RLO_Deltaproteobacteria_60_19 (100%)
4 3754 bp 55.06 8.27 95.66
PLM4_65_b1_redo_sep16_scaffold_59235
Species: RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated (50%)
4 3679 bp 56.97 6.12 95.65
PLM4_65_b1_redo_sep16_scaffold_3131
Class: Deltaproteobacteria (95%)
20 17892 bp 56.84 7.29 95.64
PLM4_65_b1_redo_sep16_scaffold_11802
Species: RLO_Deltaproteobacteria_60_19 (66.67%)
9 8998 bp 56.87 6.35 95.62
PLM4_65_b1_redo_sep16_scaffold_74713
Species: RLO_Deltaproteobacteria_60_19 (50%)
2 3214 bp 59.24 6.53 95.58
PLM4_65_b1_redo_sep16_scaffold_59246
Species: RLO_Deltaproteobacteria_60_19 (50%)
4 3679 bp 53.63 6.03 95.57
PLM4_65_b1_redo_sep16_scaffold_14993
Species: RLO_Deltaproteobacteria_60_16 (50%)
6 7925 bp 58.15 7.29 95.39
PLM4_65_b1_redo_sep16_scaffold_25487
Class: Deltaproteobacteria (85.71%)
7 5921 bp 55.80 6.59 95.36
PLM4_65_b1_redo_sep16_scaffold_81974
Class: Deltaproteobacteria (75%)
4 3044 bp 54.43 9.36 95.30
PLM4_65_b1_redo_sep16_scaffold_10995
Species: CSP1_5_NC10 (60%)
5 9350 bp 59.65 7.09 95.29
PLM4_65_b1_redo_sep16_scaffold_47101
Class: Deltaproteobacteria (60%)
5 4208 bp 54.78 5.60 95.25
PLM4_65_b1_redo_sep16_scaffold_93520
Phylum: Chloroflexi (50%)
4 2813 bp 54.07 4.96 95.24
PLM4_65_b1_redo_sep16_scaffold_73400
Species: RLO_Deltaproteobacteria_60_19 (66.67%)
3 3248 bp 60.90 7.30 95.23
PLM4_65_b1_redo_sep16_scaffold_80347
Class: Deltaproteobacteria (50%)
4 3080 bp 53.47 8.13 95.16
PLM4_65_b1_redo_sep16_scaffold_22166
Class: Deltaproteobacteria (75%)
4 6400 bp 58.80 7.27 95.16
PLM4_65_b1_redo_sep16_scaffold_25320
Class: Deltaproteobacteria (100%)
7 5943 bp 58.03 7.17 95.10
PLM4_65_b1_redo_sep16_scaffold_29173
Species: RLO_Deltaproteobacteria_57_22 (66.67%)
3 5506 bp 56.57 5.91 95.08
PLM4_65_b1_redo_sep16_scaffold_50282
Class: Deltaproteobacteria (75%)
4 4053 bp 57.98 6.11 95.04
PLM4_65_b1_redo_sep16_scaffold_48592
Phylum: Proteobacteria (60%)
5 6246 bp 58.42 6.87 95.00
Displaying items 51-100 of 882 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.