ggKbase home page

PLM4_90_b2_sep16_scaffold_3430_4

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_54_9

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(2101..2562)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilE bin=GWE2_Gallionellales_58_10 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 151.0
  • Bit_score: 87
  • Evalue 9.20e-15
pilE; Type IV pilus biogenesis protein PilE similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 116.0
  • Bit_score: 80
  • Evalue 3.20e-13
Tax=RBG_13_Deltaproteobacteria_52_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 154.0
  • Bit_score: 176
  • Evalue 2.10e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Deltaproteobacteria_52_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGATGAGGGGGAAAGAGGGAGTTACACTTATCGAAGTCATGATCGTGGTGGTCATCGTGGGGCTCTTGGCCGCCATTGCTATTCCCGCCTATAACAACTATATCACCAGATCCCGCCGCTCCGATGCCTTCACCGCCCTGGAAACAGTCAGGGCAGCACAGGAAATGTACCGGGCAGAGAGGGGTTTTTATGCCAGTGACTTTTTTGATGTTGTTGGGGGAGTTACTGTTAATGTATTAGCAGGATGTTCCGCGAACATGGCGGGCGACAACTATAATATAGCTTTCGTGGCATGGGGATTAACCCCCCCTACATACACAATGCATGCCACTGCCTTGCCGACTGGAAAACAGGTGAATGATAGATACCCTATATTTAGCATAGATCAGAATGGAACGCACCAGTATTTCGACACCAAGGATGGAAATTGGCATACGGGAGGTTGGGAGGGTCTGCGCTAA
PROTEIN sequence
Length: 154
MMRGKEGVTLIEVMIVVVIVGLLAAIAIPAYNNYITRSRRSDAFTALETVRAAQEMYRAERGFYASDFFDVVGGVTVNVLAGCSANMAGDNYNIAFVAWGLTPPTYTMHATALPTGKQVNDRYPIFSIDQNGTHQYFDTKDGNWHTGGWEGLR*