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PLM4_90_b2_sep16_scaffold_1083_2

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_48_13

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 2 ASCG 7 / 38
Location: 867..2660

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD Tax=Geobacter RepID=A5G8S3_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 605.0
  • Bit_score: 679
  • Evalue 2.80e-192
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 605.0
  • Bit_score: 679
  • Evalue 7.90e-193
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 597.0
  • Bit_score: 939
  • Evalue 2.10e-270

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Taxonomy

RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1794
ATGGCGAAGGGTGGAAAGATCAAAGAAGTTGAACAATTGATTCATATGGAAGGGGAGAAAGGATTTCTGACCTTCGACGAGTCGAACGATATCCCTCCCAACGATATTGTCTCCTCTGACCAGATTGATGATGTCCTCATGATGTTCGACGAAATGGACATCGATGTCGTGGATGACCTCCAGGGGCTGAAAGTGGAGGAAGAAAAGGCCATCGAGAAGGATGAAGAGGAAGGCGATGAGTTAGAGGTGGAGACCTTTGGGAGGGCCACGGACCCCGTCCGGATGTATCTCCGCGAGATGGGGTCGGTTTCCCTCCTGACGCGAGAAGGGGAGGTGGAGATCGCCAAAAGGATTGAAAGCGGTAAAAGAGCAGTGCTGAGCGTCGTCTTAAACTGCCCTATGGCGGTTAAAGAGGTCATCAATCTGGGCAGTATGATTAAGGCCGGAAAGGTAGAGATTCGGGAGGTCACCAACGAGATCGACGAGGAGGAAACCAGCTTTGAGGAAGAGCAGATCCAGAAGAAGCAGATTTTAGACCTCATCGAAAAGATTAAGCGAAAAGATGAAGACCTCCGGGGACTGCTGAAAGGGAAGGCGGTGCCGAGGAGGAAGGTCCAGAAGCAGGGGAAGAAGAAACAGAAAGAGACAAAGAGAAAACAAAAGGGGATGAAAAGGAGACAGGAGGAGATTAAAAAACGACAAGAAGAGATCCTGGAATTCTTCAACCGGATGAATCTGAGAGATACTCAGATTCATAAGATCGTTCAGAAGATGAAGCAGATGCTGAACCGGCTGGAGAAAGGGGAGAGTGAAATCAAGAAGATCGAAGATAAGTGGGGGATTTCTGTTCAGGAGGCACGAATCTATCTGAAGAAGTTGAAGGGAAGGAGTGTGAGTGAGAAGAAACTTCTTCGAACCCGAAAATTGAATAAAGGCGATCTCCAAGAGATTTCCCGAGCGGTCATGGGGGTCCAAAAGAAGATCCACAAGGTGGAAACGGAATGTGGCCTGACCGCTGACAGGTTGGCCGCAGCGGTGAAAGCCATCGTGGAAGGGGAGACAAGAGCCAAGGAGGCCAAGAGTGAACTGGTGAAGGCGAACTTGAGACTGGTCGTTTCCATTGCCAAAAAATATACGAATCGTGGGCTTCAATTCTTAGACCTCATTCAAGAAGGGAATATCGGGTTGATGAAGGCGGTGGATAAATTTGAATACCAGCGAGGTTACAAGTTTAGTACCTATGCGACCTGGTGGATCCGGCAGGCGATCACGCGAGCCATTGCTGATCAGGCGCGGACCATTCGGATCCCCGTTCATATGATCGAGACGATCAATAAATTGATCCGGACCTCCAGATACCTCGTCCAGGAGATAGGGAGAGAGCCCACTCCCGAAGAGATCGCCGAGAAGATGGATATGGTTTTGGATAAGGTGAGGAAGGTGCTGAAGATTGCCAAAGAGCCTATTTCCCTTGAAACACCCATCGGCGAAGAGGAAGATAGCCACTTAGGGGATTTCATCGAAGACAAAGCAGTCATTTCCCCGCAGGAGGCTGTGATCAGCGCAAATCTATCAGAACAAACCCAAAAGGTCCTGGCCAGCCTCAACCCCAGAGAGGAGAAGGTGTTGAGGATGCGGTTTGGAATTGGAGAAAAGTATGACCATACGCTGGAAGAAGTGGGACAGGATTTTGATGTCACCCGGGAAAGAATCCGGCAGATCGAGGCAAAGGCATTAAGGAAATTACGACATCCCAGCCGGGCAAGGAAGTTGAAAAGTTTCCTTGAAACGTAG
PROTEIN sequence
Length: 598
MAKGGKIKEVEQLIHMEGEKGFLTFDESNDIPPNDIVSSDQIDDVLMMFDEMDIDVVDDLQGLKVEEEKAIEKDEEEGDELEVETFGRATDPVRMYLREMGSVSLLTREGEVEIAKRIESGKRAVLSVVLNCPMAVKEVINLGSMIKAGKVEIREVTNEIDEEETSFEEEQIQKKQILDLIEKIKRKDEDLRGLLKGKAVPRRKVQKQGKKKQKETKRKQKGMKRRQEEIKKRQEEILEFFNRMNLRDTQIHKIVQKMKQMLNRLEKGESEIKKIEDKWGISVQEARIYLKKLKGRSVSEKKLLRTRKLNKGDLQEISRAVMGVQKKIHKVETECGLTADRLAAAVKAIVEGETRAKEAKSELVKANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYQRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRYLVQEIGREPTPEEIAEKMDMVLDKVRKVLKIAKEPISLETPIGEEEDSHLGDFIEDKAVISPQEAVISANLSEQTQKVLASLNPREEKVLRMRFGIGEKYDHTLEEVGQDFDVTRERIRQIEAKALRKLRHPSRARKLKSFLET*