ggKbase home page

PLM4_90_b2_sep16_scaffold_10417_5

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_48_13

near complete RP 42 / 55 MC: 3 BSCG 45 / 51 MC: 2 ASCG 7 / 38
Location: 3052..3399

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NI37_DESAR similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 116.0
  • Bit_score: 151
  • Evalue 4.00e-34
TraR/DksA family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 116.0
  • Bit_score: 151
  • Evalue 1.10e-34
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 116.0
  • Bit_score: 228
  • Evalue 3.60e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGGATCAGGAAAAGCTTCTCTATTTTAAAGGACTGTTCGAGGGAATGCTCCATGACCTCTTAGTGGAAGCCGGAAAAACATGCACCGATATGCGCCAGGACAGCAAAGGGGACTTCCCCGACCCTACCGACCGAGCCTCTTTGGAAGCGGACCGAAACTTCCTTCTGAGAATCAAGGACCGTGAGAGGAAGTTGATCACGAAAGTCAAGGAGGCAATGGACCGGGTGGATAATGGAACATTTGGAATTTGCGAGTCCTGTGGAAGGCCTATTTCTGAAAAGAGGCTGATGGCGAGACCGGTGACCACGCTGTGCATCGAATGCAAAACCGAAGGAGAGAATCAAGAA
PROTEIN sequence
Length: 116
MDQEKLLYFKGLFEGMLHDLLVEAGKTCTDMRQDSKGDFPDPTDRASLEADRNFLLRIKDRERKLITKVKEAMDRVDNGTFGICESCGRPISEKRLMARPVTTLCIECKTEGENQE