ggKbase home page

PLM4_90_b2_sep16_scaffold_350_6

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_46_9

near complete RP 40 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 5143..6939

Top 3 Functional Annotations

Value Algorithm Source
Type IV-A pilus assembly ATPase PilB bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 616.0
  • Bit_score: 728
  • Evalue 4.00e-207
pilB; type IV pilus biogenesis ATPase PilB similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 599.0
  • Bit_score: 670
  • Evalue 3.70e-190
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 600.0
  • Bit_score: 979
  • Evalue 1.40e-282

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1797
ATGGCAGAACGTCTTGCTGAACTGCTTGTCAAGAGAAATTTTATTACTCCTGAACAACTCAAAAAAGCGGCGGAAGAGCAGAAATTTAAAGGGGGTCGCTTAGAATCTACCCTGGTGAAGTTGGGATTTGTTAAGGAAGATGACCTACTATCCTTTTTGAGTGCGCTGTATCGAGTTCCTTCCGTAAAGCTCTCCAAGATTGAAATCAACCCGAATGTGATCAAATTGGTCCCAGCCAGCAAAGCGAAGAATCACTTTGTCGTTCCTGTTCAACGAGTCGGCCCTAAATTGACCGTCGCCATGGCAGATCCCAGCAATATTGTCGTCATTGATGAACTCAAATTTATGACTGGTTTCAATGTCGAGCCGGTGGTTGCTTCAGAAACTGAGATCATCGAAGCGATAAAAAAATATTATGGAGGGGGCGGGAGTGTCGCGGGGATGGGAAAGGTTGGGTTTGAAGCCAGCGACTATAACCTGGATGAGGAGGCCCCCACCACGATAGATAGTAGCATGATGCTCGAAGATGATACGGTCAACGTCGAAGACTTCGATTCTCTCGTCCATGGGGCGGTGGATAATATTGAGGTCATTGAAACCACACAAACAGATGAAGGAGGGGAGATTGAAGGTCCCATCATCAAGATCGTTAATGGAATTCTGGTCAAAGCCATCAAATTAGGAGCCAGCGACATCCATTTTGAACCGTATGAGAAGATTTTCCGAGTGAGATATCGACTCGATGGTGTGTTGAGGCGGGAGATGGCGCTTCCCGTAAAGATCAAGAATGCGATCGTTTCCCGATTAAAAATTATGGCCAGGTTGGATATTGCTGAAAAACGACTTCCTCAGGATGGAAGGATCAAGTTACGCATGGCGAAGGGACGGGAAATGGACTTCCGTGTTTCTTCCGTCCCCATCCTTTATGGTGAAAAAATTGTCCTCCGTTTATTAGATAAATCCTCTTTACAATTAGATATGACAAAATTGGGCTTTGAGCCGTCATCCTTAGAGGAACTAAATAAGGCCATTCATAAACCTGTTGGGATGATTCTCGTGACCGGTCCAACAGGAAGTGGAAAAACGACCACCCTCTATTCGGTCCTGTCCGAATTGAATAAAGAGACTGAAAACATCATGACGGCTGAAGACCCGGTGGAATATAATTTTATGGGGATCAATCAGGTCCAGATGCATGATGATATTGGTCTTACCTTTGCTTCTTCACTCCGTTCATTTCTTCGTCAAGACCCCGATATCATCATGGTGGGCGAGATTCGAGATTTTGAAACCGCTCAAATCGCCATCCAAGCAGCGTTGACCGGACACCTTGTCTTGAGCACCGTCCACACGAATGATGCCCCAGGAACGATTACAAGATTGGTCGATATGGGCATCGAACCCTTCTTAATCTCATCTTCGATTATTTTAGTTCTCGCCCAACGCTTGGCGCGGAAGATCTGTATGGAGTGTAGGGAGCAGATCAAAGTCCATCCCCAACTCCTGATCGATTTGGGTGTCCCCCCTGATGAGGCCAAAACCGTTCCCGTCTACAAAGGGAAAGGGTGCCCCATCTGCAGTAATACCGGATATAAAGGCCGCATCGGGCTCTATGAAGTGATGCCCATGAAAGAAGAGGTCAAAGAGTTGATATTGGGTCGTGCTTCAGCCTCCGAAATAAAAAAGGAGGCTTTCCGTTTAGGAATGAGGACATTGAGGCAAAGCGGGATTCATAAAGTCAAGGAAGGCCAGACGACCATTGAGGAAGTGCTCAGGACAACGATGGAGGATCGATAA
PROTEIN sequence
Length: 599
MAERLAELLVKRNFITPEQLKKAAEEQKFKGGRLESTLVKLGFVKEDDLLSFLSALYRVPSVKLSKIEINPNVIKLVPASKAKNHFVVPVQRVGPKLTVAMADPSNIVVIDELKFMTGFNVEPVVASETEIIEAIKKYYGGGGSVAGMGKVGFEASDYNLDEEAPTTIDSSMMLEDDTVNVEDFDSLVHGAVDNIEVIETTQTDEGGEIEGPIIKIVNGILVKAIKLGASDIHFEPYEKIFRVRYRLDGVLRREMALPVKIKNAIVSRLKIMARLDIAEKRLPQDGRIKLRMAKGREMDFRVSSVPILYGEKIVLRLLDKSSLQLDMTKLGFEPSSLEELNKAIHKPVGMILVTGPTGSGKTTTLYSVLSELNKETENIMTAEDPVEYNFMGINQVQMHDDIGLTFASSLRSFLRQDPDIIMVGEIRDFETAQIAIQAALTGHLVLSTVHTNDAPGTITRLVDMGIEPFLISSSIILVLAQRLARKICMECREQIKVHPQLLIDLGVPPDEAKTVPVYKGKGCPICSNTGYKGRIGLYEVMPMKEEVKELILGRASASEIKKEAFRLGMRTLRQSGIHKVKEGQTTIEEVLRTTMEDR*