ggKbase home page

PLM4_90_b2_sep16_scaffold_1711_3

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_46_9

near complete RP 40 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(1256..1963)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit bin=GWA2_Methylomirabilis_73_35 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 201.0
  • Bit_score: 206
  • Evalue 1.60e-50
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 219.0
  • Bit_score: 191
  • Evalue 2.00e-46
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 226.0
  • Bit_score: 255
  • Evalue 4.20e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGGGATGTCCGCTTTTTAGAGGTCTTAAGGCTCATCGTGGGACTTTGATGAAAGGACATTTTCAGTTTCTTTTCATCGGATTTTTATGGCTGATGTTTTTAGTGGTTTTTTCTTCAGCTTGCTCCAATGAAAAATCGGGAAAGCCTGCTTCTGCTCCTCTACCCGTTACCGTGGCCACGGCGACTCAAAAAAATGTTCCTGTTCAGCTTCGTGCCATCGGGAATGTGCAAGCCTATTCAACGGTGACAGTCAAATCCAAGGTGGGAGGAGAGCTGGTAAGCGTCCATTTCACAGAAGGTCAGGATGTAAAAAAGGGTGAACTTCTCTTCACAATTGATCCTCGGCCTTTTGAAGCTAACCTCAAGCAGGCCGAGGCTAATCTGGCAAGGGATATAGCACAGGTTGGCCAGGTTGAGGCCGACCTGGCAAAGAATATGGCCCTGGTGAAACAGACTGAGGCCAACCTTGAAAGGGATATCACTCATGCGCAAAATGCCAAAGTAGATGCTGAACGTTATTCATCTCTCATCGAAAAGCAAGTCATCTCTAAGCAGCAATATGATCAGGTTCAAACGAATGCAGAGGCCCTCGAAGCAACCGTCCGTGCGGATAAGGCAGCCAAAGAGAGCGCAGAGGCAGCAGTCCGTTCCTCGAAAGCCGCTTTGGAGAATGTCCAGGCTCCTCGAAGCAACCGTCCGTGCGGATAA
PROTEIN sequence
Length: 236
MGCPLFRGLKAHRGTLMKGHFQFLFIGFLWLMFLVVFSSACSNEKSGKPASAPLPVTVATATQKNVPVQLRAIGNVQAYSTVTVKSKVGGELVSVHFTEGQDVKKGELLFTIDPRPFEANLKQAEANLARDIAQVGQVEADLAKNMALVKQTEANLERDITHAQNAKVDAERYSSLIEKQVISKQQYDQVQTNAEALEATVRADKAAKESAEAAVRSSKAALENVQAPRSNRPCG*