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PLM4_90_b2_sep16_scaffold_1885_8

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_46_9

near complete RP 40 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(4699..6354)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD Tax=Cystobacter fuscus DSM 2262 RepID=S9QMZ3_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 573.0
  • Bit_score: 480
  • Evalue 1.40e-132
rpoD; RNA polymerase sigma-70 factor RpoD similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 538.0
  • Bit_score: 478
  • Evalue 1.50e-132
Tax=RBG_16_Deltaproteobacteria_48_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 521.0
  • Bit_score: 778
  • Evalue 5.70e-222

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Taxonomy

RBG_16_Deltaproteobacteria_48_10_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1656
ATGGAAAAAATTTCAGTGGAAAGAAATAAAAGAAATAGAAATAAGGAAAGGCGTTTGAAAAAACGGATTCCAAAAAAATTCTTCAGATCTGAGTCCCGCCAAGAGCGGGACGAAGATGCCCTGACCATATCCGATGAGTTGGGCCTCGGTGTGGTCAACGAGTTTCAAGGATTGAAAGTAGGGGATGAGAATGTTCTGCCGAGGGAAGAAGAGGAGGTGGTTGAAAACAATCTTGAGCCCGTGGAGATTGCTAAGAGGATCGAGAGCGGACAACAAGAGGTGTTAAGCGTGCTGATCAGCTGTCCCATTGCTTTCAGGGAAGTCGTCAGCCTTGGAGATGCCCTTTGTGCTGGAAAGATAAAGATCAAAGAGTTGACCAATGAGATCGACGATGAAGAGACGAGTGGTGATGAAGCGCAGATCCAGAAGAAGAGGATTCTCAAATTAATCCATAAAATTTGTAAGAAGGAAGCCAGCATTCGACTTCTCCAGAAAAAGTTGTGGTGCAGGAAGAGAGGACCTTCTAAAAAGAAGATTCAAGAGCAGATTTGGAAGAAAAAGGTTAAGATATTTGATACTTTTAAACAGCTCAACTTGAGGGGAGAACAGATTCTCCGAATAGTCCATAAATTGAGGCAGTGGAATATCAGGATGGAAAAGGCTCAAAAAGAGCTGAGACAATATGAGAAAGACTTAGGGATTCCAATCCAGGAGGCCAGAAACTTCTTAAAGGTAATGAAAAAAAAGGCAATTAAAAAAAGTCCTCTGTCCCCTGTTAAAGTTGACCTTCAGCTAAAGGATTTAGAGGAAATGGACAGGATCGCTCGACATGTCAAAAGGAAGGTAAGTAGAATGGAGGTGGAATGTGGCTTTTCTTCAGATCAGATCAAAGAGGCATTGAGGGCGATTGAGAAAGGGGAGGCTAAGGCAAAAGAAGCGAAGATTGAATTGGTGAAGGCTAATCTAAGGTTGGTCATCTCCATTGCCCGGAGATACATCAACCGGGGGCTTCACTTTCTGGATTTGATCCAGGAGGGGAATATCGGGCTAATGAAGGCGGTGGACAAGTTCGAATACCAAAGAGGCTATAAGTTCGGAACGTATGCGACATGGTGGATCCGGCAGGCTATGACGCGAGCTATTGCCGATCAAGCCCGGACCATCCGCATCCCTATCCACATGATTGAAGTCATCAACAAACTGAATCGGACCTCTCGAACACTGGTCCAGCAGATGGGGAGGGAGCCCACCTCAGGGGAGATTGCCGAAAGATTGGGGATGTCTCTGGAAAATGTGCAAAAGGTTTTTAAGATCACCCAAAGGCCCATTTCGCTCGAAACGCCTATTGGTGAGGAAGGGGATAGCCGGTTAGAGGATTTTATTGAAGATAAAGAATTGATTTCCCCTCAGGATGCGGCGATCAGCTCCAACATGGCAAGGCGGATTCAAAAAGTTCTCTCCACACTAAACGAAAGGGAGGAGAAGATTTTGAGGATGCGGTTCGGAATCGGAGAGAAGCATGACCATACACTTGATGAGGTAGGGCAGTATTTTGAACTTACCCGGGAGAGGATCCGCCAGATTGAGGACAAGGCCTTAAGGAAGTTGAAACATTCCAGCCGGGCCGATAAACTAAGGAGTTTCATCGATTATTAA
PROTEIN sequence
Length: 552
MEKISVERNKRNRNKERRLKKRIPKKFFRSESRQERDEDALTISDELGLGVVNEFQGLKVGDENVLPREEEEVVENNLEPVEIAKRIESGQQEVLSVLISCPIAFREVVSLGDALCAGKIKIKELTNEIDDEETSGDEAQIQKKRILKLIHKICKKEASIRLLQKKLWCRKRGPSKKKIQEQIWKKKVKIFDTFKQLNLRGEQILRIVHKLRQWNIRMEKAQKELRQYEKDLGIPIQEARNFLKVMKKKAIKKSPLSPVKVDLQLKDLEEMDRIARHVKRKVSRMEVECGFSSDQIKEALRAIEKGEAKAKEAKIELVKANLRLVISIARRYINRGLHFLDLIQEGNIGLMKAVDKFEYQRGYKFGTYATWWIRQAMTRAIADQARTIRIPIHMIEVINKLNRTSRTLVQQMGREPTSGEIAERLGMSLENVQKVFKITQRPISLETPIGEEGDSRLEDFIEDKELISPQDAAISSNMARRIQKVLSTLNEREEKILRMRFGIGEKHDHTLDEVGQYFELTRERIRQIEDKALRKLKHSSRADKLRSFIDY*