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PLM4_90_b2_sep16_scaffold_8543_1

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_46_9

near complete RP 40 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 105..1940

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease protein MsbA Tax=Syntrophus aciditrophicus (strain SB) RepID=MSBA_SYNAS similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 597.0
  • Bit_score: 642
  • Evalue 3.90e-181
phospholipid-lipopolysaccharide ABC transporter similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 597.0
  • Bit_score: 642
  • Evalue 1.10e-181
Tax=RBG_16_Deltaproteobacteria_50_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 611.0
  • Bit_score: 922
  • Evalue 1.60e-265

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Taxonomy

RBG_16_Deltaproteobacteria_50_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1836
ATGTCTCTCTATCGCAGACTCCTCAGGTTAGTTAAACCCTATTGGCTCAAATTAGCCTTCGCCATGATCTGTATGGTCTTTGTCTCCTTTCTTACAGCCACTCAGGCATTTCTTGTTAAACCCGCCCTCGATGGTGTCTTCTTCAACAAAAATATGGAGATTCCACCACTCGTAAAAAATATCATTATTCAACTTCATCTTGAAAATCTACTCCTCATAAAGGATAGGGAGATACTCCGTCTCCTCCCAATTGCTATCATCCTCCTTTTTTTCCTGAAAGGGATCTTTAATTATGGTCAAGCTTATCTGATGAATTATGTGGGTCTAAAGACAATCGCAGATATCAGGGAAAAGCTCTATGATCACCTCCAGACCCTTTCCCTCTCTTTCTTTACTAAAACACCCACTGGCATCCTCATCTCCAGGATCACGAGTGATGTTACCCTGATTCAGGGAGCGGTCTCCAATGCCATTGCCGGCATTCTCAAAGATGCTTTTACCATCTTCTTTTTAATCGGTGTCGCCTTCTTCCAAAGTTGGAAACTGGCTATCATTGCCTTCATCATCTTTCCTTTGGTTATCATTCCGATTAAAGAATTTGGAAAGAGGATGCGCAAATTTGCTCGAAAGGGACAAAAGCGAGTTGGACTCCTTACCACCTTTCTCCATGAGACCATTACAGGGAACCGGATTGTCAAGGCCTTCAATATGGAAGAGTATGAGAAGCGACGCTTCGCTTTGGAGAATGATCGATTATTCAAAACCTTTCTTAAGCGTGTAAAGATCCGCGCCCTTTCCCACCCTTTGATGGAATTATTGGGAGGAATCGCAGTTGCTATTATCATCTGGGTGGGAGGCAATAGTGTCATTCGAGGGGATTTGACCCCAGGAACTTTTTTCTCATTCTTGGCCGCCCTTTTAATGCTCTATCCGAGCCTTCGTGATTTGAGCAAGGTCAATCTTGAGATTCAGGAAGGTTTGGCAGGAGCAACGCGAGTCTTTGAACTCCTCGATACCACCACGGAGATCAAGGATGAAGAGGGGGCGGTTCCGCTCTCACCCATTTCCAAGGGGATCGATTTTCAAAACATCACCTTCAAATATGATGAGGAGATCGTACTCAAAGACATTTCCCTCCATGTGAAGGTTGGAGAAGTGATTGCCTTGGTGGGCATGAGCGGGGCGGGCAAAACCTCTTTAGTAAATCTTTTACCTCGTTTCTATGATGTGGAGAAAGGCCAAATTCTTATTGATGATGATGACATTCGAAAGGTCACTCTAAAATCCCTAAGGGACCAAATCGGTTTGGTCACCCAGCAAACGATCCTCTTTAATGATACGGCCCGAAATAATATCGCCTATGGAAATCAGAAATGCTCCGATCAAGAGATTGTCGAAACAGCTAAGGCAGCCAATGCCCATGACTTCATCCAGAAATTACCTAAAGGGTACGATACGATTATCGGCGAGCAAGGGGTCAAACTTTCAGGAGGGGAACGTCAACGCATCTCCATCGCCAGAGCTCTCTTAAAGAATGCTCCTATATTGATTTTGGACGAAGCCACCTCCTCCCTTGATTCCGATTCTGAAACAGAGGTCCAAAGAGCTCTGGAAGAGTTGATGAAAGGGAGAACCGTTTTCGTCATTGCCCATCGGCTTTCAACCATCCGAAATGCCCACCGGATTGTCGTTCTTTCTGAAGGCCGAATTGTGGAGGAAGGCACTCATGAGGAATTGATGGTTTTCAACGGTGAATATCGACGTCTCTACGATCTTCAGTTCAAAGATGACGGGATGAGAGTTTGGACAGCCCCCAGGGTAAAGAAGGTCTATTGA
PROTEIN sequence
Length: 612
MSLYRRLLRLVKPYWLKLAFAMICMVFVSFLTATQAFLVKPALDGVFFNKNMEIPPLVKNIIIQLHLENLLLIKDREILRLLPIAIILLFFLKGIFNYGQAYLMNYVGLKTIADIREKLYDHLQTLSLSFFTKTPTGILISRITSDVTLIQGAVSNAIAGILKDAFTIFFLIGVAFFQSWKLAIIAFIIFPLVIIPIKEFGKRMRKFARKGQKRVGLLTTFLHETITGNRIVKAFNMEEYEKRRFALENDRLFKTFLKRVKIRALSHPLMELLGGIAVAIIIWVGGNSVIRGDLTPGTFFSFLAALLMLYPSLRDLSKVNLEIQEGLAGATRVFELLDTTTEIKDEEGAVPLSPISKGIDFQNITFKYDEEIVLKDISLHVKVGEVIALVGMSGAGKTSLVNLLPRFYDVEKGQILIDDDDIRKVTLKSLRDQIGLVTQQTILFNDTARNNIAYGNQKCSDQEIVETAKAANAHDFIQKLPKGYDTIIGEQGVKLSGGERQRISIARALLKNAPILILDEATSSLDSDSETEVQRALEELMKGRTVFVIAHRLSTIRNAHRIVVLSEGRIVEEGTHEELMVFNGEYRRLYDLQFKDDGMRVWTAPRVKKVY*