ggKbase home page

PLM4_90_coex_sep16_scaffold_4143_1

Organism: PLM4_90_coex_sep16_Deltaproteobacteria_55_11

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(3..488)

Top 3 Functional Annotations

Value Algorithm Source
mucD; protease Do (EC:1.3.1.74) similarity KEGG
DB: KEGG
  • Identity: 31.9
  • Coverage: 163.0
  • Bit_score: 79
  • Evalue 9.90e-13
Protease bin=GWA2_OP3_53_43 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3 similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 153.0
  • Bit_score: 112
  • Evalue 3.70e-22
Tax=RBG_13_Deltaproteobacteria_52_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 159.0
  • Bit_score: 231
  • Evalue 5.90e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Deltaproteobacteria_52_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGATTAACATGAAGCGCATCCATATTTTCGGTATCTTCATCCTGCTGGCAGTTGCCCTGCTTGCCGGCGCCTGCGCCCATAAAGATGCGCGACGCGCACAAAGCGCGCGCGTGACCCCGGTGGTCCAGGTGGTCAGGGTGTACGCGCCGGTGGTGGTCAACATCAGGACGGAGAACGTCGTCGATTTGAAAAAACTGCCCGAATGGGGGCGGTACGGGGCGCAGCTCGACGCCTATTTCAAGAAATATTACGGGGAGCTCTATTCCGAAGGGGTGTTGCAGTACAAGAGCCTGGGCTCCGGGGTGATCGTGAGCAACGAGGGGCTGATCGCGACCAATGCGCACGTGGTGCAGAAGGCGACCCGGATCTATTGCGTGCTCTACGACGGCACCATGGTCGAGGCGAAGCCTCTCCGGGTGAGTCCTGGGGACGATCTCGCCATCATCAAGGCCGAGCTTCCCTATCCGGTGATAAATATCAGGTTT
PROTEIN sequence
Length: 162
MINMKRIHIFGIFILLAVALLAGACAHKDARRAQSARVTPVVQVVRVYAPVVVNIRTENVVDLKKLPEWGRYGAQLDAYFKKYYGELYSEGVLQYKSLGSGVIVSNEGLIATNAHVVQKATRIYCVLYDGTMVEAKPLRVSPGDDLAIIKAELPYPVINIRF