ggKbase home page

PLM4_90_coex_sep16_scaffold_16059_5

Organism: PLM4_90_coex_sep16_Deltaproteobacteria_55_11

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 1625..2344

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase Tax=Paenibacillus vortex V453 RepID=E5YVS2_9BACL similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 235.0
  • Bit_score: 252
  • Evalue 2.60e-64
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 238.0
  • Bit_score: 249
  • Evalue 8.10e-64
Tax=RBG_16_Deltaproteobacteria_54_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 239.0
  • Bit_score: 417
  • Evalue 1.10e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_54_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
GTGGTCTTAGTCCGTCTGCACAAGATCCTCGCCGACGCCGGGGTCGCCTCCCGCAGGAAAGGAGAAGAATTGATTCTGGCAGGAAGGGTCAGTGTCAACAATAAGGTTATCAGGGAGCTGGGGATCATGGCTGATCCCGCTTATGATCGGATCAGGGTAGATGGAAAGCCGCTTCCTCACCCCGCCCCCAAGGTCTATTACCTCCTCTACAAGCCTCGCGGGGTTATCACCTCCCTCCATGACCCCGAGGGGAGGACTACCATCAAGGATCTCATCCCGCGGATTAAGGCCAAGATCTTTCCCGTGGGGAGACTCGATTATGACGCCGAGGGACTTTTGTTGCTCACCAACGACGGGGAGATGGCCATGCGGCTGGCGCACCCCCGCTACCGTGTCCCCCGGACATATCTGGTAAAGGTGAAAGGGGTCTTGACAACTGATGAGATGGCGAGGATCGAGAAGGGGGTCATGCTGGACGACGGGATGAGCCCTGGGATAAAGGTCACCCCCATAAAGAGGCTGCAAAAGAACTCCGTGGTGAGGGTTACCTTGCACGAGGGCAGGAACCGCGTGATCAAGAGGACCTTTGAGGCGATGCGGCATCCGGTCTTGAGGCTCAAGCGGATCGGATTTGCCTCCCTCACCCTGGAAGGGCTGCGGCCCGGCGATTACCGCCCCCTCTCATCGGAAGAAATAGAAGATGTGCGAGGTCTGCTATGA
PROTEIN sequence
Length: 240
VVLVRLHKILADAGVASRRKGEELILAGRVSVNNKVIRELGIMADPAYDRIRVDGKPLPHPAPKVYYLLYKPRGVITSLHDPEGRTTIKDLIPRIKAKIFPVGRLDYDAEGLLLLTNDGEMAMRLAHPRYRVPRTYLVKVKGVLTTDEMARIEKGVMLDDGMSPGIKVTPIKRLQKNSVVRVTLHEGRNRVIKRTFEAMRHPVLRLKRIGFASLTLEGLRPGDYRPLSSEEIEDVRGLL*