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PLM4_90_coex_sep16_scaffold_3012_1

Organism: PLM4_90_coex_sep16_Deltaproteobacteria_65_7

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 MC: 4 ASCG 10 / 38
Location: 2..2128

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] bin=bin5_DeltaP species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 708.0
  • Bit_score: 1198
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 710.0
  • Bit_score: 956
  • Evalue 4.00e-276
Tax=RBG_16_Deltaproteobacteria_64_85_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 708.0
  • Bit_score: 1261
  • Evalue 0.0

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Taxonomy

RBG_16_Deltaproteobacteria_64_85_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2127
GTCTCGCCCAATCAGCTCGTCTCCGTCGCCGCCTCGCTCATCCCGTTTCTGGAGCACGACGACGCGAACAGGGCGCTCATGAGGTCCAACATGCAGCGCCAGGCGGTGCCGCTCCTTCGGACGGAGCCGCCCCTGGTGGGCACGGGGATGGAGGCCGTCGTGGCGCAGGATTCCGGCGCGGCGGTGGTCGCCCGAAGGACGGGAATGGTGGAATCCGTGGACGCCCGCAGGATCGTCATACGGCCCGAGGAACCGGACGCGGCCGGGAAGTACGGGGCGGACATCTACAACCTCGTGAAATTCCGCCGCTCGAACCAGAACACGTGCGTCAACCAGACGCCGATCGTGACCCTTGGCCAGCACGTTTCGAGGGGGGAAGTGATCGCGGACGGCCCCGCGACTTCCGAAGGCGAGCTCTCACTCGGCAGAAACGTGCTCGTGGCCTTCATGCCCTGGGGGGGATACAACTTCGAGGACTCGATCCTGGTCTCGGAAAAGATCGTGAAGGAGGACGTTTTCACCTCCATCCACATCGAGGAGTTCGAGTGCGTCGCCCGCGAGACGAAGCTGGGGAAGGAGGAGATCAGCGCCGACATACCCAATATCAGCGAGGAATCCCTGAAAGATCTCGACGATAGCGGGATCATCCGCATCGGGGCGCGCGTGAAGCCGATGGACATCCTCGTCGGGAAGGTCACCCCCAAGGGGGAAACCCAGCTTTCTCCCGAAGAGAAACTGCTGCGCGCGATCTTCGGCGACAAGGCCGGGGATGTCAAGGACTCCTCCCTTAGGGTCCCGCCGGGGATCGAGGGGATCGTCATCGACGCCAAGGTCTTCACCCGGAAAGGCGGAGAGAAGGACGAGCGGGCCCAGCTCCTGGAGGACAAGGAGACGGACAGGCTCGTCCGGGACCAGGACGACGAGATCCGGATCATCCTGGAAACGGCCTACGGGAAGATGCATTCCATGCTCCTGGGGAAGACATCCGCCACCCGGCTCACCGGCGAGGACCGGTCGGACGTGATCCTCACGAAGCGGAAGAAGCTGACCGCGGAGGTCCTGGACGCCATCCCCCGCGAGATGTGGTTCCAGGTCGCCGTGGAGGAGGACCCGATCGTCAAGGAACGCCTGGACGAGATCCACCAGGTCGCCCTCGACCAGGTGAGCCTCGTCCGCGCGGTTTTCGAAGAGAAGATCGGCCGCATCCGGAAGGGCGACGAGTTGCCGCCCGGCGTGCTGAAGATGGTCAAGGTGTACATCGCGATGAAAAGGAAGCTGTCGGTGGGCGACAAGATGGCCGGCCGGCACGGGAACAAGGGCGTCATCTCGCGCGTTTTGCCGGAAGAGGACCTGCCATACCTCGCCGACGGGTCGCCCGTCGATATCGTGCTCAACCCGCTGGGGGTCCCGTCCCGTATGAACGTAGGGCAGATCATGGAGGCCCACTTGGGGTGGGCGGCGCACGGCCTCGGGGAGCAGATCCGGCAGATGGTAGACAACGCGTTCAGCGCGAAATCGGTCCGCGAGTGGTTGAGGAAGATCTACAATTCGGATCGGTTCTCCGCGTACATGGACGAACTCTCCGACGACCGGATCCGTGAACTGGGGAAGACAATGTCCTCCGGCGTGTTCATGGCGTCCCCGGTGTTCAGCGGGTCCACGGAGGAGGAGATCCGCCAGTACCTTACGTTCGCGGGACTGCCGGAATCCGGTCAGACCACGTTGTACGACGGGAGGACCGGGCAGCCCTTCCAGCAGGCCGTCACGATCGGATCGATGTACATGATGAAGCTGCATCACCTCGTCGACGACAAGATCCACGCACGCTCCACGGGCCCATACTCCCTCGTCACCCAGCAGCCGTTGGGCGGGAAGGCGCAGTTCGGCGGCCAGAGGCTGGGGGAGATGGAGGTGTGGGCCCTCGAGGCGTACGGCGCGGCGTTCACGCTCCAGGAGTTCCTCACGGTAAAGTCGGACGACGTCCCGGGGCGGGCGCGCATGTACGAGGCGATCGTGAAAGGAAACTTCTCCCTGGAGCCGGGACTGCCGGAATCCTTCAATGTCCTCATCAAGGAGCTCCAGGCCCTGGGCCTGGACGTGGACCTGATCAGCGAGGAAGGGAAATAG
PROTEIN sequence
Length: 709
VSPNQLVSVAASLIPFLEHDDANRALMRSNMQRQAVPLLRTEPPLVGTGMEAVVAQDSGAAVVARRTGMVESVDARRIVIRPEEPDAAGKYGADIYNLVKFRRSNQNTCVNQTPIVTLGQHVSRGEVIADGPATSEGELSLGRNVLVAFMPWGGYNFEDSILVSEKIVKEDVFTSIHIEEFECVARETKLGKEEISADIPNISEESLKDLDDSGIIRIGARVKPMDILVGKVTPKGETQLSPEEKLLRAIFGDKAGDVKDSSLRVPPGIEGIVIDAKVFTRKGGEKDERAQLLEDKETDRLVRDQDDEIRIILETAYGKMHSMLLGKTSATRLTGEDRSDVILTKRKKLTAEVLDAIPREMWFQVAVEEDPIVKERLDEIHQVALDQVSLVRAVFEEKIGRIRKGDELPPGVLKMVKVYIAMKRKLSVGDKMAGRHGNKGVISRVLPEEDLPYLADGSPVDIVLNPLGVPSRMNVGQIMEAHLGWAAHGLGEQIRQMVDNAFSAKSVREWLRKIYNSDRFSAYMDELSDDRIRELGKTMSSGVFMASPVFSGSTEEEIRQYLTFAGLPESGQTTLYDGRTGQPFQQAVTIGSMYMMKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAAFTLQEFLTVKSDDVPGRARMYEAIVKGNFSLEPGLPESFNVLIKELQALGLDVDLISEEGK*