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PLM4_90_coex_sep16_Deltaproteobacteria_65_7

PLM4_90cm_coex_sep2016_RBG_16_Deltaproteobacteria_64_85_curated_65_7
In projects: PLM4_90cm_coex_sep2016  |  ERML-PLM4  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: RBG_16_Deltaproteobacteria_64_85_curated  →  Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 201-250 of 530 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_90_coex_sep16_scaffold_24790
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
4 1748 bp 65.22 6.09 84.61
PLM4_90_coex_sep16_scaffold_24780
Class: Deltaproteobacteria (75%)
4 1749 bp 60.66 4.63 81.13
PLM4_90_coex_sep16_scaffold_56946
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1751 bp 66.82 8.05 88.24
PLM4_90_coex_sep16_scaffold_24213
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1768 bp 64.31 7.55 91.12
PLM4_90_coex_sep16_scaffold_24203
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1769 bp 62.01 7.97 99.21
PLM4_90_coex_sep16_scaffold_24088
Species: RBG_16_Deltaproteobacteria_64_85_curated (66.67%)
3 1773 bp 64.41 6.68 97.12
PLM4_90_coex_sep16_scaffold_23988
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1777 bp 64.38 6.75 95.89
PLM4_90_coex_sep16_scaffold_23660
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1789 bp 64.62 5.03 99.94
PLM4_90_coex_sep16_scaffold_23637
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1790 bp 61.45 7.63 99.55
PLM4_90_coex_sep16_scaffold_23522
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1794 bp 65.83 7.44 100.00
PLM4_90_coex_sep16_scaffold_56296
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1798 bp 66.02 7.68 72.41
PLM4_90_coex_sep16_scaffold_65952
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1800 bp 63.83 6.33 95.33
PLM4_90_coex_sep16_scaffold_23353
Species: RBG_16_Deltaproteobacteria_64_85_curated (66.67%)
3 1801 bp 62.08 7.00 98.28
PLM4_90_coex_sep16_scaffold_66360
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1803 bp 69.27 7.24 45.09
PLM4_90_coex_sep16_scaffold_23133
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1809 bp 68.93 6.47 100.33
PLM4_90_coex_sep16_scaffold_22979
Species: RBG_16_Deltaproteobacteria_64_85_curated (75%)
4 1816 bp 64.37 6.19 88.88
PLM4_90_coex_sep16_scaffold_64578
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1817 bp 67.53 8.83 95.27
PLM4_90_coex_sep16_scaffold_22800
Species: RBG_16_Deltaproteobacteria_64_85_curated (50%)
2 1823 bp 60.50 7.57 66.15
PLM4_90_coex_sep16_scaffold_22783
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1824 bp 63.21 5.18 98.85
PLM4_90_coex_sep16_scaffold_52717
Species: RBG_16_Deltaproteobacteria_64_85_curated (75%)
4 1838 bp 59.25 7.18 79.00
PLM4_90_coex_sep16_scaffold_66615
Species: RBG_16_Deltaproteobacteria_64_85_curated (66.67%)
3 1843 bp 56.10 4.88 86.92
PLM4_90_coex_sep16_scaffold_22295
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1843 bp 65.27 8.87 99.62
PLM4_90_coex_sep16_scaffold_46744
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1847 bp 66.32 9.50 98.11
PLM4_90_coex_sep16_scaffold_40576
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
4 1853 bp 65.73 6.88 97.63
PLM4_90_coex_sep16_scaffold_21779
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1865 bp 66.92 6.11 95.23
PLM4_90_coex_sep16_scaffold_40112
Species: RBG_16_Deltaproteobacteria_64_85_curated (80%)
5 1875 bp 63.20 7.60 96.00
PLM4_90_coex_sep16_scaffold_21472
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1878 bp 64.00 7.67 90.10
PLM4_90_coex_sep16_scaffold_21457
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
4 1879 bp 67.11 6.47 95.16
PLM4_90_coex_sep16_scaffold_21441
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1880 bp 66.65 6.38 100.21
PLM4_90_coex_sep16_scaffold_21314
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1885 bp 60.16 4.54 93.26
PLM4_90_coex_sep16_scaffold_21067
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
1 1898 bp 62.12 4.50 94.52
PLM4_90_coex_sep16_scaffold_20964
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1902 bp 64.41 5.36 97.32
PLM4_90_coex_sep16_scaffold_20921
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1904 bp 66.96 7.64 100.37
PLM4_90_coex_sep16_scaffold_20775
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1911 bp 64.15 9.03 70.33
PLM4_90_coex_sep16_scaffold_46410
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
1 1916 bp 62.11 9.08 87.21
PLM4_90_coex_sep16_scaffold_20624
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1918 bp 66.63 6.41 93.69
PLM4_90_coex_sep16_scaffold_20559
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1921 bp 66.37 7.26 99.01
PLM4_90_coex_sep16_scaffold_20504
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1923 bp 64.64 6.94 98.44
PLM4_90_coex_sep16_scaffold_20459
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1925 bp 62.65 7.09 98.49
PLM4_90_coex_sep16_scaffold_20449
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1926 bp 64.80 7.94 91.90
PLM4_90_coex_sep16_scaffold_40615
Class: Deltaproteobacteria (100%)
3 1927 bp 64.56 9.11 95.43
PLM4_90_coex_sep16_scaffold_20197
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1938 bp 67.75 8.44 100.16
PLM4_90_coex_sep16_scaffold_20023
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1946 bp 68.14 6.24 100.05
PLM4_90_coex_sep16_scaffold_19923
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
1 1951 bp 64.74 7.30 99.95
PLM4_90_coex_sep16_scaffold_19777
Species: RBG_16_Deltaproteobacteria_64_85_curated (50%)
2 1958 bp 65.12 6.89 92.24
PLM4_90_coex_sep16_scaffold_19732
Species: RBG_16_Deltaproteobacteria_64_85_curated (50%)
2 1960 bp 65.36 8.42 96.43
PLM4_90_coex_sep16_scaffold_19627
Species: RBG_16_Deltaproteobacteria_64_85_curated (75%)
4 1965 bp 62.09 7.18 99.39
PLM4_90_coex_sep16_scaffold_19537
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1969 bp 67.75 8.00 99.19
PLM4_90_coex_sep16_scaffold_19409
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1975 bp 68.86 8.05 98.73
PLM4_90_coex_sep16_scaffold_19389
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1976 bp 65.79 7.89 99.29
Displaying items 201-250 of 530 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.