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PLM4_5_b1_sep16_scaffold_839_2

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: 2846..5089

Top 3 Functional Annotations

Value Algorithm Source
diguanylate cyclase Tax=Herbaspirillum lusitanum RepID=UPI00030E7269 similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 695.0
  • Bit_score: 771
  • Evalue 6.80e-220
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJL93494.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 691.0
  • Bit_score: 760
  • Evalue 1.70e-216
sensory box/GGDEF family protein similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 683.0
  • Bit_score: 745
  • Evalue 1.10e-212

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Taxonomy

Herbaspirillum sp. CF444 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2244
ATGGTGCTCGCGCTGGAAAAGCGCGAGCACCAGATCGAGCAGTCGCGCCGCGCGCTGCGCGAAAAAGACCGCATGCTCGCGACGCTGATGAGCAACCTGGACGGGATGGTCTACCGCTGCCGCAACGATGACGCCTGGACGATGCAGTTCGTGAGCGACGGCTGCTCCGATCTGACCGGCTACCGTCCCGACGAACTCCTGCACAACCGGTTGATCTCTTTCGAGGACATCAAGCATCCGGAAGACCGGCAGCGGGTGCGCGAAGAAATCGAGGCTGCGCTGAGCGAGAAGCGCCGTTTCTTCATCGAATACCGGATCCAGTGCCGTAACGGCGACATCAAGTGGGTATGGGAGCGCGGCGTCGGCATTTATGGCAAGCGCGACGCGGCAGTAACGCTCGAGGGATTCATCGAGAACGTGACCGAGCGTAAGCTGTCGACTCAGGCGCTGCAGCAGGCAGAGCGCAGCTTTCGCAGTATTTTTGAGAACGCCACTGAAGGCATTTTCCAGACCTCGCCCGACGGGCGTTTTCTGAACGTCAATCCGGCGCTCGCCCGCATCTACGGATTCGCGACACCGGCCGAGCTGATCGCCAGCGTCGGCGACATCCAGCACCAGATTTACACCGACCCGACGCGGCGGACGGAATTCATGCAGCTGATGCGAGACGCGGGCACTGTCACCAATTTCGTGTCAGAAATCCGGCGCAAAGGCGGCGACCGCATCTGGGTTTCCGAAAATGCGCGCGCGGTGCTCGACGAATCCGGCAATCTGCTGTTTTTCGAAGGCACCGTCGAGGACGTTACGCAGAACAAGCTCGACCAGGAAAAACTCGAGCATCTCGCCAATCACGATCCCGTGACGAACCTGCCCAACCGGCTGCTGATGAACGACCGGCTGCGCCAAATGATGCTCAACGCGCAGCGCAGCAACAGCATCGTCGCGGTTGCGCTGGTCGACCTCGACCATTTCAAGCTGATCAACGACACATTCGGGCACAACCGCGGCGATCAGCTATTGCAGACCATGTCGCACCGCATGCTGGCATGCGTGCGCGAGACTGATACGGTCGTGCGGCTCGGCGGCGACGAATTCGTGCTGTTGCTATCGGGTGCCGGCCGCGGCGAGGCGGTGTCGCAGGCCGTGCAGCGTGTGCTCCATGCGATCGCGCGGCCGTCGCGTATCGAGGGTCGCGAGCTCTCGGTCTCCTGCAGCGTCGGCGTCAGCGTTTTTCCTCGCGACGGCCGCGACGTGCAGACCCTGCTGCGCAATGCCGACACGGCGATGTATAAAGCCAAGGAATACGGACGCAACAATTTCCAGTTTTATTCGCCGGAAATGAATACCGCCATCTCCGAGCGGCTGGAAATGCAATCCTCACTGCGCAGCGCGGTCGAGCACGAGCAATTCGTGCTGCTCTATCAGCCGAAAATCGATCTCGTGTCGGGACAGATTGACGGCATGGAGGCATTGCTTCGCGTCAGGGACGAGCTGGGCGGCCTTTCGCTGCCGGAAAATTTCATCGAGCTGGCGGAAGAGACCGGCATGATCGTGCGCATCGGTGAATGGGTGATGCGCGAGGCTTGCAGATTCAACCGCTCGCTGCAGGACCGAGGTATCGCGCCGATGCGGGTGGCGATCAATTTGTCGGCCCGTCAGTTGACGCGCTACGATCTGGTACGCGCGGTTGAGCAGGCGCTGAGCGAGGCGCGGCTGTCGGCGCAATGCCTCGAGCTTGAGCTGACCGAAAGCATGGTCATGGAAGACCCCGAAAGCGTGATTGCGATACTGACGCAGCTGCAGGGGCTGGGCATACAGTTGAGCATCGACGATTTCGGCACCGGCTATTCGAGCTTAAGTCACCTCAAGCGCTTTCCGGTCACTAGCCTGAAGATCGATCAATCGTTCGTGCGTGAACTCGACCAGGAAGCCAATGCTTCGGCCATCGTCAAGGCTATCATCTCGATCGGGCACAGCCTCGACATGAAAGTGATCGCGGAAGGCGTGGAGACCGAGCAGCAGATGTCGTTCCTGGTGGAGAACGGCTGCGACGGCATGCAGGGTTTCCTGTTCAGCCGTCCGCTCACCGCCGACGAGTTTGTGACGCTGATCGAGCGCGAACGCGCGGGCGGCGAAAAATTCTCGCTGCTGCGCGAGATGTGCGCGACCTACAACGAGAAAGCTGTGCCCGAGCTGGCAGTCGACGTCGGCAACTCCTGGCCGGCGCAGCGCCGCACGCTATAA
PROTEIN sequence
Length: 748
MVLALEKREHQIEQSRRALREKDRMLATLMSNLDGMVYRCRNDDAWTMQFVSDGCSDLTGYRPDELLHNRLISFEDIKHPEDRQRVREEIEAALSEKRRFFIEYRIQCRNGDIKWVWERGVGIYGKRDAAVTLEGFIENVTERKLSTQALQQAERSFRSIFENATEGIFQTSPDGRFLNVNPALARIYGFATPAELIASVGDIQHQIYTDPTRRTEFMQLMRDAGTVTNFVSEIRRKGGDRIWVSENARAVLDESGNLLFFEGTVEDVTQNKLDQEKLEHLANHDPVTNLPNRLLMNDRLRQMMLNAQRSNSIVAVALVDLDHFKLINDTFGHNRGDQLLQTMSHRMLACVRETDTVVRLGGDEFVLLLSGAGRGEAVSQAVQRVLHAIARPSRIEGRELSVSCSVGVSVFPRDGRDVQTLLRNADTAMYKAKEYGRNNFQFYSPEMNTAISERLEMQSSLRSAVEHEQFVLLYQPKIDLVSGQIDGMEALLRVRDELGGLSLPENFIELAEETGMIVRIGEWVMREACRFNRSLQDRGIAPMRVAINLSARQLTRYDLVRAVEQALSEARLSAQCLELELTESMVMEDPESVIAILTQLQGLGIQLSIDDFGTGYSSLSHLKRFPVTSLKIDQSFVRELDQEANASAIVKAIISIGHSLDMKVIAEGVETEQQMSFLVENGCDGMQGFLFSRPLTADEFVTLIERERAGGEKFSLLREMCATYNEKAVPELAVDVGNSWPAQRRTL*