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PLM4_5_b1_sep16_scaffold_899_16

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(18168..18722)

Top 3 Functional Annotations

Value Algorithm Source
cytochrome c prime bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 148.0
  • Bit_score: 127
  • Evalue 7.40e-27
class II cytochrome c similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 147.0
  • Bit_score: 120
  • Evalue 4.40e-25
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 152.0
  • Bit_score: 201
  • Evalue 9.70e-49

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Taxonomy

RLO_Betaproteobacteria_68_19 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGCCGCGTGCCAGCGTGTTTAGGGTTCAAGCCGGCGGCTATGCGGGCGCCGTCGATACCAAGTTATCTGTTGGCATCAACCACGAGGAGACAGGAATGAACAAGCGATTGTTGACTGCAGTTTTGACGCTGACGCTCGGCGCCGGATATTCGCTCACCGCGTTCGCGCAGGCGAAACCGGAAACCCTGGTCAAACAACGCCAGGCGGCAATGGCGTTGCAGGGCAAGTACTTTGGTCCGCTGGGCGGTATGGCGCAGGGCAAGGTTCCGTATGACGCCGCCGTGGTCCAGCGCAATGCGGTTTATCTCGACTCGCTGTCGCGCATGCCGTGGGACGGATTTACCGCGAACACGCGGGATGTGAAGACCGGCGCATTGCCCGCCGTCTACACGGACACCGCCAAGTTCAAGGAAGCAGCGGACCATCTGCAAAGCGACGTCTCCAAGCTCGTGGCGGTAAGCAAGAGCGGCGATGAAGCGGCCGTCAAGGCGCAGATCGGCGCGGTCGGCAAGGCCTGCGCCAACTGTCACGATTCGTTCCGCGAGAAACAGTAG
PROTEIN sequence
Length: 185
MPRASVFRVQAGGYAGAVDTKLSVGINHEETGMNKRLLTAVLTLTLGAGYSLTAFAQAKPETLVKQRQAAMALQGKYFGPLGGMAQGKVPYDAAVVQRNAVYLDSLSRMPWDGFTANTRDVKTGALPAVYTDTAKFKEAADHLQSDVSKLVAVSKSGDEAAVKAQIGAVGKACANCHDSFREKQ*