ggKbase home page

PLM4_5_b1_sep16_scaffold_4261_15

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: 12227..12604

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S30 Tax=Thiobacillus thioparus RepID=UPI00037DDB8B similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 109.0
  • Bit_score: 99
  • Evalue 1.90e-18
30S ribosomal protein S30 {ECO:0000313|EMBL:AKH36579.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 108.0
  • Bit_score: 101
  • Evalue 7.10e-19
ribosomal subunit interface protein similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 119.0
  • Bit_score: 95
  • Evalue 6.00e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosomonas communis → Nitrosomonas → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGCAAACCCAGCTGAAAATCACCCTGCAGGACCTTGAACATTCCGCCGCACTGGATGCGCGGATCCGCGCCAAGGTCGCCAAACTGGAACAGGCTTTCCCCCGTTTAATTGGTTGCCATGTCGTCGTGTCCGAGCCGCATCGCCATCGGCAGAACCCGCGGTCGTTTGCGATAACGCTAAATATTGCTTTTCCAGGCGGGGAAGTCGTCGTGAAGCGCGACGACCGGGACGATGTCTACGCGCTTGTGCGCGACGCATTTGCGACAGCGGAACGTGAGTTGGAAAAATCATTGGGCCGCCGCGCCGCACGCGGCGAACCCCATCATGGATTGGCGCCGGCAACGGTGCTCGCAAATGAGGAGTTCGATCATCAATGA
PROTEIN sequence
Length: 126
MQTQLKITLQDLEHSAALDARIRAKVAKLEQAFPRLIGCHVVVSEPHRHRQNPRSFAITLNIAFPGGEVVVKRDDRDDVYALVRDAFATAERELEKSLGRRAARGEPHHGLAPATVLANEEFDHQ*