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PLM4_5_b1_sep16_scaffold_7871_4

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: 2192..5098

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 848.0
  • Bit_score: 1152
  • Evalue 0.0
Transcription-repair-coupling factor Tax=Nitrosospira sp. APG3 RepID=M5DIR1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 844.0
  • Bit_score: 1142
  • Evalue 0.0
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 848.0
  • Bit_score: 1139
  • Evalue 0.0

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Taxonomy

Sulfuricella sp. T08 → Sulfuricella → Sulfuricellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2907
ATGGAAGCACAGCCGGCCGGCCGCAAAAGCCGCGTCGGCCCGTTTCACGGCTCGGCCGATGCGCTCGCGCTCGCCGAACTGGCGGGAAAGGTGCGTCCGCTGCTCGTGATAACGGCGACTGCGGGTGCAGCGCAGCGCCTGCTCGAAGAAATCCCCTACTTCAATCCGGCGCTCAAAGTGCATTTGCTGCCGGACTGGGAAACGCTGCCCTACGATACTTTTTCGCCGCACCACGATCTGGTGTCCGAGCGATTAGCCACGCTGTACCAGATCACGCAGCAGGCGTTCGACATCGCGATCGTGCCGGTGACCACCGCGCTATACCGCCTCACCCCCATCGAGTACCTCGCCGCACGCACGTTCTTCTTCAAGCAGGGCGAAAAGCTCGCCGCCGACGAATTGCGCAAGCAGCTGACGGTCGCCGGCTATACGCACGTCGCGCAGGTGCTGTCGCCGGGCGAATACAGCTTCCGCGGCGGACTCATTGACCTGTTTCCGATGGGCAGCGCGCTGCCGTACCGGATCGACCTCTTCGACGACCAGATCGAATCGATCCGCAGTTTCGACGTCGATACCCAGCGCAGTATTTATAAGGTCAGCGAAGTGCGGCTGCTGCCGGCGCGCGAATTTCCGCTCGACGAAGACGGGCAGACGATGTTTCGCCGCAATTTCCGCACGCGCTTCGAAGGCGATCCGTCGCGGTCACGGCTGTACAAGGACGTGAGCAACGGCATCGCGCCCGCGGGGGTCGAATACTACCTGCCGCTCTTTTTCGAGCACACTGCGCTCCTGACCGACTATCTGCCGCCGCATACGACTGTCGTGCTGCATGGCGACGTGCAACCCGCGATCGAGCAGTTCTGGCAGGACACGCAGGCGCGCTTTAACCTCCTGGGCGGCGATCGCAGCCAGCCGCTGCTGCCCCCGCGCGATTTGTTCCTTTCAACCGATGCATTCTTCGGCGCGCTCAAGCCGTTCACGCGCGTCGAAATCGGCGCAGTGGAGGACCCTGAGGAAAACGCCTCCCCGGTCACCCCTCACGCTGCACCGGCGACCGCCCCGCTTCCGCCGGTCGCAGTCGACCGCCGCGCCGACGATCCGCTGAGCAAACTGCAGGCGTTTATCGCGGGCTACGACGGCCGCGTGCTGCTCGTCGCCGAAGCGCTCGGCCGCCGCGAGACGATGCTCGAATATTTCCGGGAACACGGCATCAAGCCCGCGCCGTGCGCGAGCTACGCCGAATTTCTAGCCGGCGAGGCGCCGGTAATGCTGGGCGTGGCGCCGCTCGCCGCCGGTTTCGTGCTCGCCGGGCAGCGTATCGCGATCATCACTGAAAACGAGCTCTATGCGTCGCAGGTGCGCCCGCGCCGCGAACGCGAAGGCCGTAAGACCAGCACCGAAGGCATGCTGCGCGACCTGTCCGAGGTCAAAGTCGGCGACCCCGTAGTCCATCTGCAACATGGCATCGGCCGTTACCTCGGGCTGCAGAATCTCGATTTCGGCGAAGGCGCGACCGAGTTCCTGACGCTCGAATACACGCGCGGCGACAAGCTGTATGTGCCGGTATCGCAGCTGCATCTCATCAGCCGCTACAGCGGCGCGCCCGCCGAAACGGCGCCGCTGCACGACCTGGGCAGTGGACAGTGGGACAAGGCCAAGAAAAAAGCCGCGGCGCAGGTACGCGATACCGCCGCCGAACTCCTGAATCTGTATGCGCAGCGCGCGCTGCGCGAAGGCCACGCGTTCAAACTCGAGCAGCACGACTACGAAGCATTCAGCGATGCATTTCCGTTCGAAGAAACGCCCGACCAGCGCGCCGCGATTACCGCGACCCTGAACGACCTGCAGCAAGGCAAGCCGATGGACCGGCTGATTTGCGGCGACGTCGGCTTCGGCAAGACGGAGGTCGCCCTGCGCGCCGCGTTCGTCGCGGTCAACGAAGGCAAGCAGGTCGTGGTGCTCGTGCCGACCACCCTGCTCGCCGAACAGCATTTCAATACGTTCTCCGACCGCTTCGCCGACTGGCCGGTCAAAATCGCCGAGCTCTCGCGCTTCCGTTCGCCGAAACAGGTCGCGGAAACGCTTGCGGCGCTGACCGCAGGCAAAGTGGATATCGTCATCGGCACGCATAAGCTCCTGCAGCAGGACATCAAGCTGAAAAACCTGGGACTCGTGATTATCGACGAGGAGCATCGCTTCGGCGTGCGCCAGAAGGAGAAGCTTAAGGCACTGCGCGCCGAAGTCGACGTACTGACGCTGACTGCGACGCCGATCCCGCGCACGCTCGGCATGGCGCTCGAAGGTCTGCGCGACTTTTCGGTGATCGCCACCGCGCCGCAGCGCCGGCTCGCGATCAAGACGTTCGTCTCCCGCCATAGCAAGGGACTCATCCGCGAAGCGGTGCTGCGCGAATTGAAGCGCGGCGGCCAGGTGTATTTCCTCCACAACGACGTCGACACCATCGCGCAGGCCGAGGACAGCCTTGCCCGGCTCGTGCCGGAATGGCAATGCGCGACTTCTACCAGCAGCGCTTCAACATTCTCTTGTGCACGACGATCATCGAAACCGGCATCGACGTGCCGACCGCCAACACGATCGTCATCAATCGCGCCGACAAATTCGGCCTGGCGCAGCTGCATCAGTTACGTGGGCGCGTCGGCCGCTCGCACCATCAGGCCTACGCGTACCTGCTGCTGCCCGACGAAGGCAACATCACGAGCCAGGCCAAGAAGCGGCTCGAGGCGATCCAGCAGATGGAAGAGCTGGGCTCGGGCTTCTTCCTCGCGATGCACGACCTTGAAATCCGCGGCGCGGGCGAAGTGCTCGGCGACCAGCAATCGGGCGAAATGCAGGAAGTCGGCTTCAACCTCTATTGCGCGATGCTCGACACCGCGGTCAAATCGCTGA
PROTEIN sequence
Length: 969
MEAQPAGRKSRVGPFHGSADALALAELAGKVRPLLVITATAGAAQRLLEEIPYFNPALKVHLLPDWETLPYDTFSPHHDLVSERLATLYQITQQAFDIAIVPVTTALYRLTPIEYLAARTFFFKQGEKLAADELRKQLTVAGYTHVAQVLSPGEYSFRGGLIDLFPMGSALPYRIDLFDDQIESIRSFDVDTQRSIYKVSEVRLLPAREFPLDEDGQTMFRRNFRTRFEGDPSRSRLYKDVSNGIAPAGVEYYLPLFFEHTALLTDYLPPHTTVVLHGDVQPAIEQFWQDTQARFNLLGGDRSQPLLPPRDLFLSTDAFFGALKPFTRVEIGAVEDPEENASPVTPHAAPATAPLPPVAVDRRADDPLSKLQAFIAGYDGRVLLVAEALGRRETMLEYFREHGIKPAPCASYAEFLAGEAPVMLGVAPLAAGFVLAGQRIAIITENELYASQVRPRREREGRKTSTEGMLRDLSEVKVGDPVVHLQHGIGRYLGLQNLDFGEGATEFLTLEYTRGDKLYVPVSQLHLISRYSGAPAETAPLHDLGSGQWDKAKKKAAAQVRDTAAELLNLYAQRALREGHAFKLEQHDYEAFSDAFPFEETPDQRAAITATLNDLQQGKPMDRLICGDVGFGKTEVALRAAFVAVNEGKQVVVLVPTTLLAEQHFNTFSDRFADWPVKIAELSRFRSPKQVAETLAALTAGKVDIVIGTHKLLQQDIKLKNLGLVIIDEEHRFGVRQKEKLKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQRRLAIKTFVSRHSKGLIREAVLRELKRGGQVYFLHNDVDTIAQAEDSLARLVPEWQCATSTSSASTFSCARRSSKPASTCRPPTRSSSIAPTNSAWRSCISYVGASAARTIRPTRTCCCPTKATSRARPRSGSRRSSRWKSWARASSSRCTTLKSAARAKCSATSNRAKCRKSASTSIARCSTPRSNR*