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PLM4_5_b1_sep16_scaffold_8546_2

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(471..1355)

Top 3 Functional Annotations

Value Algorithm Source
shikimate 5-dehydrogenase Tax=Methylosinus sp. LW4 RepID=UPI00035E52ED similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 280.0
  • Bit_score: 366
  • Evalue 1.50e-98
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 280.0
  • Bit_score: 336
  • Evalue 4.80e-90
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 280.0
  • Bit_score: 457
  • Evalue 9.20e-126

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Taxonomy

R_Betaproteobacteria_62_17 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGCCTGTCAACGCGGTAAGCGAGGCATGCGAAAATACCCCGATGGCAAATCCGGACCGTTTCCTGCTCGCGGGCGTCATGGGCTGGCCCGTCATGCATTCGCGCTCGCCGCTGCTGCACAACTACTGGTTCAAGCAGCATGGCCTTGCCGGAACCTACGTGCCGCTCGCAATCGCGCCCGCGACACTCGCCGCGGCGTTGCGTGCACTGCATCCGCTGGGCTTCGCCGGTTGCAACCTCACGCTCCCGCACAAGCAGGCCGCGATGGCTGTCGTCGACGAAGTCGACGCGCTCGCAAAAAGCATCGGCGCTATCAGTTGCGTGATCGCGCAGCCGGACGGCTCGCTCGCTGGAACCAACAACGATTGTTATGGCTTCATTCAGAATTTGCAGCACTCGCAGCCCGGCTGGCGCGCGGATGCGGGTCCGGTGGTCGTGATCGGCGCCGGCGGCGGCGCGCGCGCCGTGTGTCATGGGCTCGCGCAGGAAGGCGCGCGAGAGATCCGGGTCGTCAATCGTTCACTCGCACGCGCGCAAAAAATTGCCGACGACTTTGGCAGTCCGCTTGCGGCTTTGCCATGGGAGCAGCGCCATGACGCCCTGGACGGCGCGGCGATGGTCGTCAACACGACGAGCTGCGGCATGGTCGGCCAGCCCGCGCTCGATCTCAAGCTCGACAAGCTGCCGAAGAACGCGCTCGCTGCCGACATCATTTACATTCCGCTCGAGACGCCGTTGCTCGCCGCGGCGCGCGCCCGCGGCAACCCGACCGTCAACGGCCTGGGCATGCTATTGCATCAGGGCCGGCCGGCGTGGAAGGCGTGGTTCGGGATCGAGCCGCAGGTTACGGCCGAGTTGAGAGCGCTGTTGGAGAAAACGATCTAG
PROTEIN sequence
Length: 295
MPVNAVSEACENTPMANPDRFLLAGVMGWPVMHSRSPLLHNYWFKQHGLAGTYVPLAIAPATLAAALRALHPLGFAGCNLTLPHKQAAMAVVDEVDALAKSIGAISCVIAQPDGSLAGTNNDCYGFIQNLQHSQPGWRADAGPVVVIGAGGGARAVCHGLAQEGAREIRVVNRSLARAQKIADDFGSPLAALPWEQRHDALDGAAMVVNTTSCGMVGQPALDLKLDKLPKNALAADIIYIPLETPLLAAARARGNPTVNGLGMLLHQGRPAWKAWFGIEPQVTAELRALLEKTI*