ggKbase home page

PLM4_5_b1_sep16_scaffold_51122_2

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(209..559)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit bin=GWC2_Methylomirabilis_70_16 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 108.0
  • Bit_score: 115
  • Evalue 2.40e-23
leuD; isopropylmalate isomerase similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 109.0
  • Bit_score: 113
  • Evalue 2.60e-23
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 113.0
  • Bit_score: 129
  • Evalue 2.90e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
GTGCTCGACTTCGGCGTGCGCGCACTGATCGGGCCCAGTTTCGGCGACGTGTTCGTCGGCAACTGCCTGCAGAACGGCATCGTGCCCGCGGTATTGCCGATCGCGGCGGTCCGCGACCTGTGGCGCCAGTTGAAGGAACACCCGGGCGCGCAAATCACCGTGGACCTCGTGCAGCAAGCGGTCATCGCGCCCGACCAAAGGCGGCACGAATTCGCGATCGATGCGACGCGCAAGGAGCGCCTGCTGAAAGGGCTCGACGACGTCGGCGTGACGCTCGAGCATCTGCCGCAAATCGAAGCATTCGAAGCAGCTTACCGCCAACGCATGCCGTGGCGGGCGTCGAAGATCTGA
PROTEIN sequence
Length: 117
VLDFGVRALIGPSFGDVFVGNCLQNGIVPAVLPIAAVRDLWRQLKEHPGAQITVDLVQQAVIAPDQRRHEFAIDATRKERLLKGLDDVGVTLEHLPQIEAFEAAYRQRMPWRASKI*