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PLM4_32_b1_sep16_scaffold_20400_1

Organism: PLM4_32_b1_sep16_Deltaproteobacteria_54_7

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(1..411)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XQD3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 137.0
  • Bit_score: 177
  • Evalue 7.90e-42
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF57957.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 137.0
  • Bit_score: 177
  • Evalue 1.10e-41
sigma factor, ECF subfamily protein similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 136.0
  • Bit_score: 125
  • Evalue 5.90e-27

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 411
ATGACCAAGTCTGAAACCGCGAGTCCCGTGCCGCCACCTGGGGAAGTTACTCAGGTGGTGGAGCACTTTTTCCGTCATGAGGCAGGCAAGATAGTCTCGACCTTGACCAGGATTTTTGGCGTCGAACAGCTGAACCGAGCTGAAGACGTGGTTCAGGAAACGTTGGTCAGGGCGTTACAGACCTGGCCCTATTACGGCATACCCAGAAATCCTTCCGCCTGGATCACACAGGTCGCAAAAAACCTGGCGCTCGATCTCATCAGGCGCGACAAAGTTTTTCGCAATAAAGAAAACGAGATCGCGCTCTTGATGGAACAGGTCTCCGCGGATGCCGAAACCGTCGATTCCGCGTCGCGCGAGAATGCCATCGCGGATGACCGTTTGTGTATGATGTTTATCTGCTGCCACCCG
PROTEIN sequence
Length: 137
MTKSETASPVPPPGEVTQVVEHFFRHEAGKIVSTLTRIFGVEQLNRAEDVVQETLVRALQTWPYYGIPRNPSAWITQVAKNLALDLIRRDKVFRNKENEIALLMEQVSADAETVDSASRENAIADDRLCMMFICCHP