ggKbase home page

PLM4_32_b1_sep16_scaffold_22379_1

Organism: PLM4_32_b1_sep16_Deltaproteobacteria_54_7

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: 3..647

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 217.0
  • Bit_score: 279
  • Evalue 2.30e-72
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 216.0
  • Bit_score: 146
  • Evalue 8.70e-33
Tax=GWD2_Deltaproteobacteria_55_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 217.0
  • Bit_score: 279
  • Evalue 3.30e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWD2_Deltaproteobacteria_55_8_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATTAAAACCGCCGAGCAGCTCAAAGGTGGCTCGGTTGCCATCGCCACGTTTGGCGGCCAGGCCGATTTTCTCTCTCGCATCGCGCTACAAAGGCTCGGACTGAATCCATTGAAGGATGTCACAATCGTGCAGATCGGCACGATCCCGGAGCGCCTGAGCGCCTTGGCGACGGGAAAGGTTCAGGCAGCCATGCTCAACTCACCGGACAACTTCAGGGCCGAGAAAGCGGGCTTTTATAATCTAGTGAGCGTGCGCCTGCCCTATCAAGGCGTCGGCGTGGCTACCACCCGCGCGTTCATTCGGGACAATCCTGACGTCGTCAGGAGGTATGTCAGATCGCAGATCGAAGCCGTCCACCGCATGAAGACTGACCGGGAGACCGGGATCAGAGTACTGGCGAAATACCTCGCTTTGCAGGACAAGGAGATCCTGGAAAGGTCCTATGATGACGCCAGCACTGACGACAAACTTCCCCAAAAACAATATCCAAGCCTAGAGGGGATCAAAAAAATTCTCGAACCGCTCGCGGAGACGGACCCAAAAGCGAAAGCCGCGAAGCCTGAGGACTTTGTCGAAATGCGCTTCGTCAAGGAGCTGGACGAGAGCGGTTTCATCGATGATCTATACAAGCGAAATAAGAGATGA
PROTEIN sequence
Length: 215
IKTAEQLKGGSVAIATFGGQADFLSRIALQRLGLNPLKDVTIVQIGTIPERLSALATGKVQAAMLNSPDNFRAEKAGFYNLVSVRLPYQGVGVATTRAFIRDNPDVVRRYVRSQIEAVHRMKTDRETGIRVLAKYLALQDKEILERSYDDASTDDKLPQKQYPSLEGIKKILEPLAETDPKAKAAKPEDFVEMRFVKELDESGFIDDLYKRNKR*