ggKbase home page

PLM4_32_b1_sep16_scaffold_36747_2

Organism: PLM4_32_b1_sep16_Deltaproteobacteria_54_7

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(597..1244)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Pseudomonas agarici RepID=UPI00030C27C9 similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 203.0
  • Bit_score: 176
  • Evalue 2.10e-41
membrane protein similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 206.0
  • Bit_score: 180
  • Evalue 4.20e-43
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 231.0
  • Bit_score: 204
  • Evalue 1.30e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_57_22 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGAAAATTCAACGAATAGCTATCCACTCTCTCCGACTTATCACTTTCACTGCGCTTATCGCTGTCATTCAGCCCCAGGCAGCTCAGGCGCAGGCGCCACAGGGTAAACCCGCTACTGTCCGGGGAAAAATCTCTGCAGTCGAAAAACAAGCGCTTAAAGTAACAACGTCCGCCGGCGAGGTCCTGGTCAAGCTGCCGGACGATGTTAGGATCGGCGGCGTAGAAGCGGCACAGCTTTCAGACATCGCAGCCGGGAACTATGTCGGTGCGACTGCAGTCAAGCAAGGCGACGGCAGTCTCAAGGCCCTCGAAGTCCATATCTTCCCCGAGAGCTCTCGCGGCACAGGTGAAGGCCACCGGCCGTGGGATCTGCAGCCCGGCTCAACGATGACCAATGCCAACGTCGAGAAAGTGGAACAGGTCGCGGTGGAAAAAATTCAAGGGCAACTGCTGACTCTTAAATACAAAGACGGAGAACAAAAAATCTTCATTCCGCCGGGAACGCCCATCGTGAAAAATGTCCCTGGCGACCGTTCGCTCCTCAAGCCTGGAACCGGCGTCTACATTCCCGCCGTGCGGGGCGAGGACGGAACTCTCACGGCCACCCGCATCACTGTCGGCGTCGGCGGCATCATGCCGCCGATGTAG
PROTEIN sequence
Length: 216
MKIQRIAIHSLRLITFTALIAVIQPQAAQAQAPQGKPATVRGKISAVEKQALKVTTSAGEVLVKLPDDVRIGGVEAAQLSDIAAGNYVGATAVKQGDGSLKALEVHIFPESSRGTGEGHRPWDLQPGSTMTNANVEKVEQVAVEKIQGQLLTLKYKDGEQKIFIPPGTPIVKNVPGDRSLLKPGTGVYIPAVRGEDGTLTATRITVGVGGIMPPM*