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Consensus taxonomy: Deltaproteobacteria → Proteobacteria → Bacteria

Metagenomic Context

Parent: PLM4_32cm_b1_sep2016_UNK Curated version: PLM4_32_b1_sep16_Maxbin2_029_curated

Properties

Avg. coverage: 6.66 Longest contig: 15.44 Kbp Bin length: 2.93 Mbp GC content: 53.77 %

Contigs count: 871 Features count: 3626 rRNAs count: 0 tRNAs count: 21

Genome completeness

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 2 ASCG 10 / 38 MC: 2

Displaying items 751-800 of 871 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
PLM4_32_b1_sep16_scaffold_77042 Species: R_Betaproteobacteria_67_26 (100%)	2	2317 bp	59.17	8.22	95.43
PLM4_32_b1_sep16_scaffold_19915 Species: Candidatus Entotheonella sp. TSY1 (50%)	2	2785 bp	57.74	7.27	91.67
PLM4_32_b1_sep16_scaffold_66247 Species: RBG_16_Acidobacteria_68_9_curated (100%)	2	2231 bp	49.13	9.21	67.91
PLM4_32_b1_sep16_scaffold_21631 Species: CSP1_5_NC10 (50%)	2	2679 bp	54.27	7.67	88.24
PLM4_32_b1_sep16_scaffold_80376 Species: GWA2_Rokubacteria_73_35_curated (50%)	2	2099 bp	56.03	5.22	101.48
PLM4_32_b1_sep16_scaffold_76003 Species: Geoalkalibacter ferrihydriticus (50%)	2	2089 bp	53.47	8.19	86.17
PLM4_32_b1_sep16_scaffold_21635 Species: Halomonas huangheensis (50%)	2	3125 bp	53.41	8.45	72.77
PLM4_32_b1_sep16_scaffold_36095 Species: RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated (100%)	2	2087 bp	55.77	6.40	97.89
PLM4_32_b1_sep16_scaffold_37376 Species: RLO_Deltaproteobacteria_60_16 (50%)	2	2051 bp	52.27	5.70	80.59
PLM4_32_b1_sep16_scaffold_35587 Species: RLO_Deltaproteobacteria_60_19 (100%)	2	2102 bp	54.80	6.64	84.35
PLM4_32_b1_sep16_scaffold_32944 Species: Candidatus Entotheonella sp. TSY1 (50%)	2	2184 bp	56.87	6.25	93.13
PLM4_32_b1_sep16_scaffold_25190 Species: Mesorhizobium sp. ORS3359 (50%)	2	2488 bp	51.21	5.91	60.77
PLM4_32_b1_sep16_scaffold_35598 Species: RLO_Deltaproteobacteria_60_19 (50%)	2	2102 bp	56.33	4.64	98.62
PLM4_32_b1_sep16_scaffold_182816 Species: RBG_16_Deltaproteobacteria_48_10_curated (50%)	2	2172 bp	49.13	4.63	42.40
PLM4_32_b1_sep16_scaffold_21145 Species: R_Betaproteobacteria_67_26 (50%)	2	2709 bp	55.52	4.54	76.41
PLM4_32_b1_sep16_scaffold_56289 Species: RLO_Deltaproteobacteria_60_19 (50%)	2	2338 bp	51.67	8.28	83.53
PLM4_32_b1_sep16_scaffold_68371 Species: RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated (100%)	2	2757 bp	54.77	6.20	75.84
PLM4_32_b1_sep16_scaffold_17653 Species: Pandoraea pulmonicola (50%)	2	2947 bp	53.72	6.31	66.17
PLM4_32_b1_sep16_scaffold_28838 Species: RLO_Deltaproteobacteria_57_22 (100%)	2	2332 bp	57.42	6.50	99.70
PLM4_32_b1_sep16_scaffold_29582 Species: RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated (50%)	2	2303 bp	50.41	7.16	88.84
PLM4_32_b1_sep16_scaffold_22295 Species: Chroococcidiopsis thermalis (50%)	2	3087 bp	53.74	7.14	87.46
PLM4_32_b1_sep16_scaffold_34487 Species: RBG_16_Chloroflexi_54_18_curated (50%)	2	2136 bp	55.34	6.74	99.02
PLM4_32_b1_sep16_scaffold_130380 Species: CSP1_6_Rokubacteria (100%)	2	2122 bp	52.73	4.59	50.61
PLM4_32_b1_sep16_scaffold_13025 Species: RLO_Deltaproteobacteria_57_22 (100%)	2	3394 bp	53.18	6.72	95.73
PLM4_32_b1_sep16_scaffold_27188 Species: RLO_Deltaproteobacteria_60_19 (50%)	2	2400 bp	52.21	6.06	97.38
PLM4_32_b1_sep16_scaffold_17168 Species: RLO_Deltaproteobacteria_57_22 (50%)	2	2985 bp	59.06	5.88	99.80
PLM4_32_b1_sep16_scaffold_58137 Species: BJP_IG2069_Desfulfarculales_53_13 (50%)	2	2035 bp	56.31	5.38	100.10
PLM4_32_b1_sep16_scaffold_30057 Species: RLO_Deltaproteobacteria_57_22 (50%)	2	2286 bp	54.94	6.36	58.66
PLM4_32_b1_sep16_scaffold_30570 Species: RLO_Deltaproteobacteria_60_19 (50%)	2	2266 bp	54.68	5.10	88.70
PLM4_32_b1_sep16_scaffold_33596 Species: Oscillatoria acuminata (50%)	2	2165 bp	51.50	6.51	81.76
PLM4_32_b1_sep16_scaffold_29364 Species: RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated (50%)	2	2312 bp	53.42	7.20	88.24
PLM4_32_b1_sep16_scaffold_37950 Species: RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated (50%)	2	2035 bp	54.89	5.68	82.56
PLM4_32_b1_sep16_scaffold_105792 Species: RLO_Deltaproteobacteria_60_19 (50%)	2	2179 bp	51.49	6.61	84.53
PLM4_32_b1_sep16_scaffold_71210 Species: RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated (50%)	2	2118 bp	51.42	6.30	56.80
PLM4_32_b1_sep16_scaffold_28115 Species: Oscillatoriales cyanobacterium JSC-12 (50%)	2	2361 bp	54.17	6.67	93.52
PLM4_32_b1_sep16_scaffold_79939 Species: R_Deltaproteobacteria_44_16 (50%)	2	2395 bp	49.98	9.52	71.27
PLM4_32_b1_sep16_scaffold_35397 Species: RLO_Deltaproteobacteria_60_19 (100%)	2	2108 bp	53.94	6.19	96.06
PLM4_32_b1_sep16_scaffold_36168 Species: RLO_Deltaproteobacteria_57_22 (50%)	2	2085 bp	55.16	5.32	95.83
PLM4_32_b1_sep16_scaffold_84019 Species: RLO_Deltaproteobacteria_60_19 (50%)	2	2124 bp	53.11	5.30	87.99
PLM4_32_b1_sep16_scaffold_41548 Species: RLO_RIF05_58_11 (50%)	2	2974 bp	56.69	7.46	94.82
PLM4_32_b1_sep16_scaffold_105808 Species: RLO_Deltaproteobacteria_60_19 (50%)	2	2324 bp	53.10	6.33	38.08
PLM4_32_b1_sep16_scaffold_34289 Species: RLO_Deltaproteobacteria_60_19 (50%)	2	2142 bp	57.47	7.07	97.06
PLM4_32_b1_sep16_scaffold_43601 Species: GWD2_Deltaproteobacteria_55_8_curated (50%)	2	2208 bp	52.08	7.34	78.13
PLM4_32_b1_sep16_scaffold_24692 Species: R_Betaproteobacteria_62_17 (50%)	2	2512 bp	52.99	8.54	89.93
PLM4_32_b1_sep16_scaffold_54124 Species: RLO_Deltaproteobacteria_60_19 (50%)	2	2296 bp	56.14	6.86	93.95
PLM4_32_b1_sep16_scaffold_72004 Species: RLO_Deltaproteobacteria_60_16 (50%)	2	2986 bp	50.90	6.73	78.16
PLM4_32_b1_sep16_scaffold_16820 Species: Oscillatoria acuminata (50%)	2	3015 bp	54.43	4.93	93.13
PLM4_32_b1_sep16_scaffold_18856 Species: RLO_Deltaproteobacteria_60_16 (50%)	2	2857 bp	56.11	5.57	99.65
PLM4_32_b1_sep16_scaffold_36192 Species: RLO_Deltaproteobacteria_60_19 (100%)	2	2085 bp	52.66	7.12	99.28
PLM4_32_b1_sep16_scaffold_52328 Species: R_Acidobacteria_59_13 (50%)	2	2309 bp	57.73	5.00	70.03

Displaying items 751-800 of 871 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

Warning! This will delete the current organism (PLM4_32_b1_sep16_Deltaproteobacteria_54_7) and add all its contigs / scaffolds to the organism you choose below

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PLM4_32_b1_sep16_Deltaproteobacteria_54_7

PLM4_32cm_b1_sep2016_Deltaproteobacteria_54_7

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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