ggKbase home page

PLM4_32_b1_sep16_scaffold_3014_3

Organism: PLM4_32_b1_sep16_Chitinimonas_koreensis_64_14

near complete RP 43 / 55 MC: 2 BSCG 42 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 1993..2475

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA Tax=Bordetella holmesii RepID=M5NMY4_9BORD similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 155.0
  • Bit_score: 182
  • Evalue 2.20e-43
dksA; RNA polymerase-binding protein DksA similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 155.0
  • Bit_score: 182
  • Evalue 6.30e-44
Tax=RBG_16_Betaproteobacteria_64_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 159.0
  • Bit_score: 233
  • Evalue 1.50e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Betaproteobacteria_64_18_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGTTTGGTGTAAAAGCAGTAAAAAAACCTGCGGCAAAACCGGCCAAGACGGCCGAGGAAAAGCCGGCGAAGAAAAACGGTTTGAGCGAGGCTGAGTTGTTGCGCGCGCCCGCGTCGCAGTACATGAGCGCCGAGCAGCTCGCGTTCTTCCGCGCGCGCTTGCTCGAGACACAAAAGGAAATGCTGGAGAAGGCAAACCGTACCTCCGAGCATCTGCGCGAGCACGAGCTCGAGCCGGATCCGACCGACCAGGCGACGATCGAGGAGGAATACGCCCTGGAGCTGCGCGCGCGCGAGCGGGAGCGAAAACTCCTGAAGAAAATCGACGAGGCGCTGCGCCGCATCGACGAGGGCAGCTACGGGTATTGCGAGGAGACGGGCGAGGCGATCGGCATTCCGCGGCTGCTTGCGCGGCCGACCGCCACGCTTACCATAGAAGCGCAGGCGCGACGCGAGCAGAAGCAGAAGCTCTACGGGGAGTAG
PROTEIN sequence
Length: 161
MFGVKAVKKPAAKPAKTAEEKPAKKNGLSEAELLRAPASQYMSAEQLAFFRARLLETQKEMLEKANRTSEHLREHELEPDPTDQATIEEEYALELRARERERKLLKKIDEALRRIDEGSYGYCEETGEAIGIPRLLARPTATLTIEAQARREQKQKLYGE*