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PLM4_32_b1_sep16_scaffold_13208_13

Organism: PLM4_32_b1_sep16_Chitinimonas_koreensis_64_14

near complete RP 43 / 55 MC: 2 BSCG 42 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 10478..10801

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, HxlR family Tax=Variovorax paradoxus (strain EPS) RepID=E6UXU1_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 106.0
  • Bit_score: 115
  • Evalue 1.70e-23
Variovorax paradoxus strain MEDvA23 contig_48, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28508.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 106.0
  • Bit_score: 117
  • Evalue 6.30e-24
HxlR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 106.0
  • Bit_score: 115
  • Evalue 4.80e-24

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGTTCGCGGGCAAGCGCCACTTCCGCGAATTCCTCCAGTCCGAGGAAGCGATCTCGAGCAATGTGCTGGCGGACCGGCTCAACTCTCTGGTCGAGAACGGGATCGTCACGCGCCGCGATGATCCAACTCACGCCCAGAAGGCCATCTACAGCCTGAGCGAGAAGGGACTCGATCTGCTGCCGGTGCTGATTGCGATGAGCGCCTGGACCCAGAAACACTATCCACGAACGCGGAAGCCCGAAGCTGTGGGTCTAATAGGGCGCGGGCCCAAGTCTCTCAAGCAGCTGGAGGCACAACTTCGGCGGGAACACGGCATCTCGTGA
PROTEIN sequence
Length: 108
MFAGKRHFREFLQSEEAISSNVLADRLNSLVENGIVTRRDDPTHAQKAIYSLSEKGLDLLPVLIAMSAWTQKHYPRTRKPEAVGLIGRGPKSLKQLEAQLRREHGIS*