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PLM4_32_b1_sep16_scaffold_22387_5

Organism: PLM4_32_b1_sep16_Chitinimonas_koreensis_64_14

near complete RP 43 / 55 MC: 2 BSCG 42 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(3203..4018)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NRU8_CHRVO similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 271.0
  • Bit_score: 391
  • Evalue 4.10e-106
rpoS; RNA polymerase sigma factor RpoS similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 271.0
  • Bit_score: 391
  • Evalue 1.10e-106
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 271.0
  • Bit_score: 432
  • Evalue 2.90e-118

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Taxonomy

R_Betaproteobacteria_65_24 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ACCCAGCTCTACCTTCATCAGATCGGCCTCAATCGCCTTTTCACTCCGGAGGAGGAGCTGCGTTTCGCGCGGCGCGCGGCGGCCGGGAATTTCGCCGCGCGGCAGAAGATGATCGAGCACAACCTGCGCCTGGTCGTGAACGTCGCCAAGGGCTATCTGAACCGCGGCATGCCGCTCCTCGACCTCGTGGAGGAAGGCAACCTCGGCCTGATGCACGCACTCGACAAATTCGATCCCGAGCGGGGCTTTCGCTTTTCGACTTACGCCACCTGGTGGATACGACAGAACATCGAGCGCTCGATCATGAACCAGTCGCGTACCATCCGGCTGCCCGTCCATGTGATCAGGGAGCTGAATATCGTGCTTCGGGCGAAGCGCCACCTCGAGGCGCACTCCAAGTGCGAGCCGACCGTCGAAGACATCGCCCACCTCGTCGGCAAGGACTCGGAGGAAGTGCGCCAGGTGCTCATGCACAGCGAGCACACCGCTTCGCTCGATACGCCGCTCGACATCGATCCGATGCTTTCCATCGGTGAATCGATCGCCGACGAGAGCGGCATGAGCCCGGAGCTGCAGCTCCACGCGACCGAGGTCGAGTCGCTCGTTCGCGAATGGCTCGCAGAGTTGAACGAAAAGCAGCGCATGGTGATCGAGCGGCGTTTCGGGTTGAATGGGCGGGAGTTGCTCACGCTCGAGCAGCTCGCTTCGACGCTCGACCTGACCCGCGAGCGGGTGCGCCAGATCCAGCTCGAGTCCCTCGCACAACTGCGAAACATCCTGGGCCGGCACGGCTTGTCAAGGGACGTGCTTCTCTAG
PROTEIN sequence
Length: 272
TQLYLHQIGLNRLFTPEEELRFARRAAAGNFAARQKMIEHNLRLVVNVAKGYLNRGMPLLDLVEEGNLGLMHALDKFDPERGFRFSTYATWWIRQNIERSIMNQSRTIRLPVHVIRELNIVLRAKRHLEAHSKCEPTVEDIAHLVGKDSEEVRQVLMHSEHTASLDTPLDIDPMLSIGESIADESGMSPELQLHATEVESLVREWLAELNEKQRMVIERRFGLNGRELLTLEQLASTLDLTRERVRQIQLESLAQLRNILGRHGLSRDVLL*