ggKbase home page

PLM4_90_b1_sep16_scaffold_2148_2

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_48_13

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(874..1575)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related bin=GWF2_Methylomirabilis_70_14 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 233.0
  • Bit_score: 278
  • Evalue 4.30e-72
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 234.0
  • Bit_score: 263
  • Evalue 4.10e-68
Tax=RBG_16_Deltaproteobacteria_48_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 233.0
  • Bit_score: 439
  • Evalue 2.70e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_48_10_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGTTAGAGATAAGAGACATTCATACCTATATTGGCGAGAGCTATATCCTTCAAGGGGTATCCATGGAAATACCCAAAGGGAAGGTGGTGGCTCTCTTAGGTCGGAATGGGATGGGAAAGACAACCCTGATCTACTCCATTATCGGATTTCGGCCGATACGGACTGGGGGCATCCTCTTTGAAGGCAAGGAAATCAGTTTGCTCCCTGCTCACCGGATCGTTCGATTGGGAATTGGCCTTGTCCCCCAGGGCAGAAGGATCTTTTCTTCTCTTACGGTAAATGAAAATTTAGAAGTTCCGTACAGATGCCCTTCCCGAAGCGAAAGAGACTTTGACGCAGAAAAGATCTTTCAGATCTTCCCGATCTTAAAGGAGAGAAAAGATCTTCGAGGTGGCAAGCTCTCCGGTGGTGAGCAACAGATGCTTGCCACGGGCCGGGGTCTTATCTCGAGGCCAAAACTGTTACTCATGGATGAACCCTCTGAGGGGCTTGCCCCCTTGTTAGTTCGGGATCTCGGTGAGATCATCCAGAGTTTCAAGGAGCAAGGTCTCACGATTCTTCTCGTGGAGCAAAAGCTTTCTTTTGCTCTTGAAATGGCCGACTATGTCTATGTCATGAGCAAAGGGAAGATTGTTTATCATTCCACTCCCGACGATTTGTGGCAGAATGAGGAAGTGAAGGCTCGACATCTGGGGATTTAG
PROTEIN sequence
Length: 234
MLEIRDIHTYIGESYILQGVSMEIPKGKVVALLGRNGMGKTTLIYSIIGFRPIRTGGILFEGKEISLLPAHRIVRLGIGLVPQGRRIFSSLTVNENLEVPYRCPSRSERDFDAEKIFQIFPILKERKDLRGGKLSGGEQQMLATGRGLISRPKLLLMDEPSEGLAPLLVRDLGEIIQSFKEQGLTILLVEQKLSFALEMADYVYVMSKGKIVYHSTPDDLWQNEEVKARHLGI*