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PLM4_90_b1_sep16_scaffold_1394_1

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_48_13

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(2..373)

Top 3 Functional Annotations

Value Algorithm Source
LysM domain protein bin=GWC2_Nitrospirae_57_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 103.0
  • Bit_score: 99
  • Evalue 1.90e-18
Peptidoglycan-binding LysM similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 107.0
  • Bit_score: 95
  • Evalue 1.00e-17
Tax=RBG_16_Deltaproteobacteria_47_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 124.0
  • Bit_score: 217
  • Evalue 8.80e-54

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Taxonomy

RBG_16_Deltaproteobacteria_47_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGAGAAGATTCGTTGGTCTCTTTTTTGCCATGATTTTGATGTTTTCCTTCTGTTTTGTTCTTCCAGGTTTGACACAAGAAACGAAGGAAACGGAAGGCGTCTATACCATCAAGAAGGGAGATACGCTATGGGATATCTCCTCTAAATTCCTAAAAGACCCTTTCCTCTGGCCAAAATTGTGGGAGAAAAATCCCTATATTAGCAATCCTCATTGGATCTATCCAGGAAACTCGATCCGACTGACTGCCGTTGAGCCAGCGAAGGGAGAGGCGCCTCAGCCCGTAAAGAAAGAGGAGACTCCGAAGGCTGCCGAGGAGAAACCTCAAGGAGCGGTTAAGGAACCAGAGGCTAAAGAGCCCGAGGTTGAAAAG
PROTEIN sequence
Length: 124
MRRFVGLFFAMILMFSFCFVLPGLTQETKETEGVYTIKKGDTLWDISSKFLKDPFLWPKLWEKNPYISNPHWIYPGNSIRLTAVEPAKGEAPQPVKKEETPKAAEEKPQGAVKEPEAKEPEVEK