ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

PLM4_90_b1_sep16_scaffold_2791_5

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_48_13

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(3399..5357)

Top 3 Functional Annotations

Value Algorithm Source
PAS/PAC sensor signal transduction histidine kinase Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FMG4_DESAA similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 607.0
  • Bit_score: 426
  • Evalue 4.70e-116
PAS/PAC sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 607.0
  • Bit_score: 426
  • Evalue 1.30e-116
Tax=RBG_16_Deltaproteobacteria_48_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 612.0
  • Bit_score: 915
  • Evalue 2.70e-263

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_48_10_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1959
ATGAAGAAAAGAAGGCCTTCTCGCCCGGCCACGGAACCTCAACAGAACGCCAGTCGGCATTTCGAGAAGATTGTCGAAATGGGGAATGACGGGATCTTCGTGTTCGATGATCGCTGTAAAATTTTGTTCGCCAATCAGATGGCCTCGGAAATCACCGGGATTCCCAGGGAAGATCTCATCGGTAAGGATTTCTATGACATCATCGGAAAACAGAACAAGAATTTTCTGGCGGAATCGTTCACTCAGGGAGAAGGCTTCGGGCAGAAGCTTTGCATGGAAATGGCCATTACGACCCCCCTAGGCCAGTTCAAGAATGCAGAGGTCTGCATTGCAGCAGCAAGATCCGACGAGGGGGATGTGAAGGCCTATGCTTACATCCGGGACATCACGGAACGGTTAAGATGCGAAAAGGAGCTCAAAGACTCTGAGGAAAAACTACGGACACTCTTTGAAAGGGTCAGGCACGGCCTGTTCATCAGTTCAAGAAAAGGCAGATTTATAGAGTGCAATCAAGCCCTCCTCGATATGCTGGGCTATCCCAACAAGAAGGATCTCCTCAGGAAAGATCTTCCGCAGGATGTCTATGTCAACCTGGAAGATCGGGACATGTTTATGGAGAGGGTCGAAAGGGAAGGCTGTGTCAAAGACATGGAAGTCGAGTTTAAGAAAAAGGACGGAGAAAAGATCACCGTCTTGTTGACAGCCTATCCGATCCGAAACGAAAAGGGAGAGATTGTCGGCTACGAGGGAATCAATCTCGATATCACGGAACGGAAACGCATCGAAGAGGAGATCAGGGAAGCCAACGAATTTTTCAGAAACCTGATTGAAAGCTCGGTGGATGGGATCATTGTCACCGACATGAAAGGGAACATCTTGATTTTCAACAAGGGGGCTGAATCCATCACGGGATATACGGCTGAGGAGGTGATCGGGAAGATCCATATCACAAGGCTGTATCCGGAGGGAATCGCCAACGAGATCATGGAAAAACTTCGGAGCCAGGACTACGGCGTCGTGGGGAAACTTTCCCCCGTTCAGTTGACCGTCATGAATAAGACCGGGGAACAGATCCCCATCCAGCTCTCCGCCGCTTTGATTTTCGATCGAAAGGGCAAAGAGATCGCCAGTGTCGGCATTTTCACGGACCTGAGGCCTCGGCTCAATATGGAGAGAAAACTTCAGGAGACCCATCTCCAACTGGTCAGCTCCGAAAAGATGGCCTCCCTCGGAAAACTGGCCGCCGGGATTGCCCATGAAATCAATAACCCTCTTGGCGGGATCTTGATCTACTCCAGCTTGCTGATGGAAGACCTTCCCGAGGAGGATCCCAAGAGACAGGATCTCGCGCGGGTCGTTCAAGAGGCGGGACGCTGCAAGGAGATTGTCAGGAGCCTTCTGGAATTCGCCCGGCAGACGGAGCCAAAAATGGAGCCCGTCGATATCAACCGGGCCATCACGGACAACCTCTTCTTTCTGGAAAACCAGGCCCTCTTTCATAACATCCGGATCGTCAAGAACCTCGACCCCTCTCTGCCCTTGGCCACAGGAAATGCGGGCCAATTGAAACAGGTCTTCATGAACATCATCATTAATGCGGCAGAGGCCATACACGGGAACGGAGAGCTCACCATCGCAACTTATCCCGCTTCGGACCGAAACGCGATCTTGATGGAGTTCACCGATACCGGGGAAGGCATTCGTGAAGAGAATCTCTCTCGTATCTTTGAACCTTTCTTTACCACGAAGGATGTCGGAAAAGGGACGGGATTGGGCCTGGCTACGTCCTATGGCATCATCGAAGACCACGGAGGCAAGATTTTTGTCAAGAGCAAAGTGGGAGAAGGAACGACGTTTACGATTGAACTCCCGATCTACCTGGTGAACAGGACCGGGTCGGAGGAAAAGCAGCCCGCCATCCGCCCAATCGATGAAGGGGAGGAAAGAATAGGAAGCTAA
PROTEIN sequence
Length: 653
MKKRRPSRPATEPQQNASRHFEKIVEMGNDGIFVFDDRCKILFANQMASEITGIPREDLIGKDFYDIIGKQNKNFLAESFTQGEGFGQKLCMEMAITTPLGQFKNAEVCIAAARSDEGDVKAYAYIRDITERLRCEKELKDSEEKLRTLFERVRHGLFISSRKGRFIECNQALLDMLGYPNKKDLLRKDLPQDVYVNLEDRDMFMERVEREGCVKDMEVEFKKKDGEKITVLLTAYPIRNEKGEIVGYEGINLDITERKRIEEEIREANEFFRNLIESSVDGIIVTDMKGNILIFNKGAESITGYTAEEVIGKIHITRLYPEGIANEIMEKLRSQDYGVVGKLSPVQLTVMNKTGEQIPIQLSAALIFDRKGKEIASVGIFTDLRPRLNMERKLQETHLQLVSSEKMASLGKLAAGIAHEINNPLGGILIYSSLLMEDLPEEDPKRQDLARVVQEAGRCKEIVRSLLEFARQTEPKMEPVDINRAITDNLFFLENQALFHNIRIVKNLDPSLPLATGNAGQLKQVFMNIIINAAEAIHGNGELTIATYPASDRNAILMEFTDTGEGIREENLSRIFEPFFTTKDVGKGTGLGLATSYGIIEDHGGKIFVKSKVGEGTTFTIELPIYLVNRTGSEEKQPAIRPIDEGEERIGS*