ggKbase home page

PLM4_90_b1_sep16_scaffold_5816_6

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_48_13

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: 2901..3104

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding protein family bin=GWA2_OP3_53_43 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3 similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 63.0
  • Bit_score: 111
  • Evalue 2.00e-22
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 67.0
  • Bit_score: 103
  • Evalue 1.50e-20
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 64.0
  • Bit_score: 115
  • Evalue 2.50e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Deltaproteobacteria_43_33 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGTCGACAGGAAAAGTGAAGTGGTTTAACGATCAGAAGGGGTTCGGATTTATTTCACCGGAGAGCGGCAAGGACGTATTTGTTCACCACTCGGCAATTACAGGAGAGGGATTCAAGTCCCTTAAAGAGGGAGACGAGGTGGAGTTCGAAACCACACAGGGTCCTAAAGGCCCTCAAGCCTCAAACGTAAAGGTTGTTGGTTAA
PROTEIN sequence
Length: 68
MSTGKVKWFNDQKGFGFISPESGKDVFVHHSAITGEGFKSLKEGDEVEFETTQGPKGPQASNVKVVG*