ggKbase home page

PLM4_90_b1_sep16_scaffold_6240_1

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_48_13

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: 2..490

Top 3 Functional Annotations

Value Algorithm Source
type II site-specific deoxyribonuclease (EC:3.1.21.4) similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 161.0
  • Bit_score: 221
  • Evalue 1.20e-55
Type II site-specific deoxyribonuclease Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X140_SALTO similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 161.0
  • Bit_score: 221
  • Evalue 4.30e-55
Tax=RBG_16_Gammaproteobacteria_51_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 162.0
  • Bit_score: 322
  • Evalue 1.90e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Gammaproteobacteria_51_14_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
CTGCCTGTCAGGCTGGCGAACGGTCGGGAAATCAGGCTTTCCCCCGGTGGCCAGAATGTCCTGGTGAAGAAGATCATGGATGATTTCTGCCCTTTATTCACGCCGGGAAGTTACGTTATTTACATTGGGGACACTCAAGCGAAGTGGGCCTATTTCGATTCAGACGCCCTGGTGCTACTGGGTGTTGAAATACAGGAACACGGGAAAATGCCTGATGTTGTGGTGCATCACGCAGAAAAGAACTGGCTGGTTCTTATTGAAGCAGTCACGAGCCACGGGCCTGTAAACCCTAAGCGCAGGCAGGAATTGAAGGCATTGTTTTCGGGATCGACCGCTGGTCTGGTTTTTGTGACCGCATTCCTTGATCGGAAGGCTATGCTGAAATACCTGAATGACATTTCCTGGGAGACTGAAGTCTGGATTGCCGAGTCCCCGACACATCTGATCCATTTCAACGGTGAACGTTTTCTCGGTCCCTATGAAGAGTAA
PROTEIN sequence
Length: 163
LPVRLANGREIRLSPGGQNVLVKKIMDDFCPLFTPGSYVIYIGDTQAKWAYFDSDALVLLGVEIQEHGKMPDVVVHHAEKNWLVLIEAVTSHGPVNPKRRQELKALFSGSTAGLVFVTAFLDRKAMLKYLNDISWETEVWIAESPTHLIHFNGERFLGPYEE*