ggKbase home page

PLM4_90_b1_sep16_scaffold_28439_3

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_48_13

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(2277..2762)

Top 3 Functional Annotations

Value Algorithm Source
formate dehydrogenase (EC:1.2.1.2) similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 159.0
  • Bit_score: 224
  • Evalue 1.10e-56
Formate dehydrogenase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAB7_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 159.0
  • Bit_score: 224
  • Evalue 3.90e-56
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 157.0
  • Bit_score: 270
  • Evalue 1.10e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
GAAATTCCGCTTCCGGAAGATGCGCGCACTCGTTTCAAGACACCTTCGGGAAAGATTGAAATTCTAAACCCAAGAGAACCTCATCCCTTGCCCTGTTATCTTCCTCCCTATAAAGGGGATCATCCCTTTCGATTGATGACGGCACCAAGTTTATACTGCTTAAATTCCTCTTTCAGGGAAAGAGAAGACCTCCGCAAAACGGAAAAGGCCATGTTCCTTCAAATGAATCCGGCTGATGCGGAGGTAAAAGGCATGAAAGAAGGTGATTCCGTCGTCGCCTTCAATCAACTCGGGAAAGTCTCTTTCATCCTCCATGTCACTCCCAAAGTTCCTTCCGGTGTGGTGGTGGCAGAGGGGATCTGGTGGCTGGAACACTCCCCTGGCCTTCGTTCTGTCAATGCGCTGACTTCCCAGCGTTTGACAGACCAAGGAGGAGGAAGTACATTCTATGACAATACCGTGGATGTGAGAATAGAAAAGAGATAA
PROTEIN sequence
Length: 162
EIPLPEDARTRFKTPSGKIEILNPREPHPLPCYLPPYKGDHPFRLMTAPSLYCLNSSFREREDLRKTEKAMFLQMNPADAEVKGMKEGDSVVAFNQLGKVSFILHVTPKVPSGVVVAEGIWWLEHSPGLRSVNALTSQRLTDQGGGSTFYDNTVDVRIEKR*