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PLM4_90_b1_sep16_scaffold_248_38

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_45_7

near complete RP 37 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 11 / 38
Location: comp(23601..23972)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. D17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 123.0
  • Bit_score: 234
  • Evalue 5.30e-59
30S ribosomal protein S12 bin=GWC2_Syntrophobacterales_56_13 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 123.0
  • Bit_score: 233
  • Evalue 8.40e-59
30S ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 123.0
  • Bit_score: 219
  • Evalue 2.70e-55

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Taxonomy

Smithella sp. D17 → Smithella → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGCCGACAGTAAATCAATTGGTTCGCAAGGGAAGAACAAAGATACAAAAGAAAACTACAACACCCGCTTTAGCCGGTTCCCCGCAGAGGCGAGGAGTTTGTGTCAGGGTTTATACATCTACGCCCAAAAAGCCAAATTCTGCTTTAAGAAAAGTCGCAAGGGTTCGTCTCGCGAGCGGTTACGAGGTGACATCATATATACCGGGAGTGGGCCATAACCTTCAGGAACATTCCGTTGTTTTAGTGAGGGGTGGCAGGGTAAAGGATCTTCCCGGTGTTCGGTATCACATCATCAGGGGTACGCTGGATGCCGTCGGAGTTCAGGACAGAAAGCAGGGAAGATCAAAATACGGGGCTAAAAAGCCGAGCTAA
PROTEIN sequence
Length: 124
MPTVNQLVRKGRTKIQKKTTTPALAGSPQRRGVCVRVYTSTPKKPNSALRKVARVRLASGYEVTSYIPGVGHNLQEHSVVLVRGGRVKDLPGVRYHIIRGTLDAVGVQDRKQGRSKYGAKKPS*