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PLM4_90_b1_sep16_scaffold_52932_2

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_45_7

near complete RP 37 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 11 / 38
Location: 389..1699

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum sp. (strain MAR08-339).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 479.0
  • Bit_score: 411
  • Evalue 8.60e-112
tRNA-splicing ligase RtcB Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HM66_ACIS0 similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 479.0
  • Bit_score: 411
  • Evalue 6.10e-112
RTCB protein similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 270.0
  • Bit_score: 433
  • Evalue 4.20e-119

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Taxonomy

Aciduliprofundum sp. MAR08-339 → Aciduliprofundum → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1311
ATGTCAGGGCTTAAAAAACTTGACGATTGCCGGTGGATGGTTCCCCAGACCGGTGGAATGAGGGTCCCGGGAATCATTTATTCAAGCGAAAGACTCATCAGGGAGATGGGGGCCGATGAGAGCCCGAAGCAGGTGGCCAATGTTGCACACCTGCCCGGTATTGTTAAGTATTCACTGGCCATGCCTGATATGCACTGGGGGTATGGTTTCCCGATAGGCGGCGTTGCGGCCTTCGATCTTAAAGACGGCATTATTTCCCCGGGCGGTGTGGGGTATGATATCAACTGCGGATGCAGGCTGGTGACAACCCGTCTTGTGTATGATGATATCAAGGATAGCGTGAAGGATCTGATAAGCGCCCTGTTTAACGATATCCCTACCGGTGTTGGTTCCAAGGGTGTCCTTAAACTCTCCGCCAAGGAAGAAAAGAAGGTTCTGATCGAAGGAGCAAAGTGGGCGGTAAATCATGGGTATGGGACAGACGATGATCTGGAAACGACGGAAGACAGGGGGGCAATGGCAGGCGCCGATCCCGAAATGGTCAGCGCGAGGGCAATTGAGCGCGGACGGGAGCAATTGGGTACCTTAGGGTCTGGCAACCATTTCCTGGAGATTGAGGTCGTCGAGGATATCTTTGATAAAGCAGCGGCAACTGCCTTTGGTCTTGAAATGGGTCAGATTGCCGTTCTCATTCACAGTGGTTCCCGGGGGCTCGGCTATCAGGTTTGTGATGATTTCCTGGCCAGGATGGTGAAACATGTCGATGATCTGGGAGTTTCCCTCCCTGACAGACAATTAGCCTGTGCGTATCTGGATTCTCCCCGGATGCGGCTGCTTTATGACGTCTGCCATAATATTGCCAAGATCGAAACGTTTCCCATCGACGGCAAAGAGGTGACGCTGTGCGTACACAGAAAAGGTGCAACGCGGGCCTTTCCTCCCGGCCATCCTGCCCTTCCGGCGCAATACAGCAAGGCAGGTCAGCCGGTATTAATCCCCGGCGATATGGGCACAGGTTCCTATGTGCTTGCGGGAACGGAGAAAGCCTTTACAGAGACCTTCGGAAGTACCTGCCATGGAGCCGGGCGTGTTATGAGCCGCACCCAGGCGACAAAAGCCGGCAGGGGAAGATCTATAGCACGGGAGATGGCTGATAAGGGTATTATCATCATGGCAAGCGGGAAAGGAACCCTCAGTGAAGAGATGCCGGAGGCATATAAGAATTTAGATCAGGTAGTGGAAGTCGTCCACAAGGCCGGCATCTCCAGGAAAGTCGCAAAACTCAGAGCATTAGGCTGTATCAAGGGGTAA
PROTEIN sequence
Length: 437
MSGLKKLDDCRWMVPQTGGMRVPGIIYSSERLIREMGADESPKQVANVAHLPGIVKYSLAMPDMHWGYGFPIGGVAAFDLKDGIISPGGVGYDINCGCRLVTTRLVYDDIKDSVKDLISALFNDIPTGVGSKGVLKLSAKEEKKVLIEGAKWAVNHGYGTDDDLETTEDRGAMAGADPEMVSARAIERGREQLGTLGSGNHFLEIEVVEDIFDKAAATAFGLEMGQIAVLIHSGSRGLGYQVCDDFLARMVKHVDDLGVSLPDRQLACAYLDSPRMRLLYDVCHNIAKIETFPIDGKEVTLCVHRKGATRAFPPGHPALPAQYSKAGQPVLIPGDMGTGSYVLAGTEKAFTETFGSTCHGAGRVMSRTQATKAGRGRSIAREMADKGIIIMASGKGTLSEEMPEAYKNLDQVVEVVHKAGISRKVAKLRALGCIKG*